Protein–RNA interactions for Protein: Q01668

CACNA1D, Voltage-dependent L-type calcium channel subunit alpha-1D, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1DQ01668 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA1DQ01668 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA1DQ01668 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA1DQ01668 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC20.34■□□□□ 0.85
CACNA1DQ01668 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA1DQ01668 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA1DQ01668 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CACNA1DQ01668 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC20.34■□□□□ 0.85
CACNA1DQ01668 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CACNA1DQ01668 AC011551.1-201ENST00000614101 683 ntBASIC20.34■□□□□ 0.85
CACNA1DQ01668 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CACNA1DQ01668 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA1DQ01668 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA1DQ01668 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC20.33■□□□□ 0.85
CACNA1DQ01668 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.33■□□□□ 0.85
CACNA1DQ01668 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CACNA1DQ01668 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNA1DQ01668 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
CACNA1DQ01668 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CACNA1DQ01668 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA1DQ01668 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA1DQ01668 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA1DQ01668 SNX5-217ENST00000606557 1087 ntBASIC20.32■□□□□ 0.84
CACNA1DQ01668 AC096887.2-201ENST00000623443 1957 ntBASIC20.32■□□□□ 0.84
CACNA1DQ01668 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC20.32■□□□□ 0.84
CACNA1DQ01668 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA1DQ01668 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CACNA1DQ01668 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CACNA1DQ01668 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.31■□□□□ 0.84
CACNA1DQ01668 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CACNA1DQ01668 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.31■□□□□ 0.84
CACNA1DQ01668 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC20.31■□□□□ 0.84
CACNA1DQ01668 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CACNA1DQ01668 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 AC004448.1-201ENST00000458332 883 ntBASIC20.3■□□□□ 0.84
CACNA1DQ01668 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 SNAI3-AS1-204ENST00000567997 2048 ntBASIC20.3■□□□□ 0.84
CACNA1DQ01668 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CACNA1DQ01668 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CACNA1DQ01668 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1DQ01668 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1DQ01668 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1DQ01668 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CACNA1DQ01668 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CACNA1DQ01668 DUX4L2-201ENST00000561772 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 AC008764.7-201ENST00000593779 1081 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L6-201ENST00000626483 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L1-201ENST00000627662 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L8-201ENST00000629013 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L3-201ENST00000630187 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L7-201ENST00000630678 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 DUX4L5-201ENST00000630834 1275 ntBASIC20.28■□□□□ 0.84
CACNA1DQ01668 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1DQ01668 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1DQ01668 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CACNA1DQ01668 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1DQ01668 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1DQ01668 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
CACNA1DQ01668 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1DQ01668 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.27■□□□□ 0.84
CACNA1DQ01668 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC20.27■□□□□ 0.84
CACNA1DQ01668 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1DQ01668 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CACNA1DQ01668 AC092803.2-201ENST00000564287 1899 ntBASIC20.27■□□□□ 0.83
CACNA1DQ01668 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CACNA1DQ01668 SRD5A1P1-201ENST00000442297 786 ntBASIC20.27■□□□□ 0.83
CACNA1DQ01668 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.27■□□□□ 0.83
CACNA1DQ01668 MIR4767-201ENST00000582827 78 ntBASIC20.27■□□□□ 0.83
CACNA1DQ01668 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.27■□□□□ 0.83
CACNA1DQ01668 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1DQ01668 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1DQ01668 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1DQ01668 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1DQ01668 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.26■□□□□ 0.83
CACNA1DQ01668 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CACNA1DQ01668 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1DQ01668 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CACNA1DQ01668 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC20.25■□□□□ 0.83
CACNA1DQ01668 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms