Protein–RNA interactions for Protein: P78345

RPP38, Ribonuclease P protein subunit p38, humanhuman

Known RBP Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPP38P78345 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPP38P78345 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPP38P78345 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RPP38P78345 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RPP38P78345 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
RPP38P78345 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC21.65■■□□□ 1.06
RPP38P78345 DUSP8P5-201ENST00000422884 1815 ntBASIC21.65■■□□□ 1.06
RPP38P78345 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
RPP38P78345 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RPP38P78345 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RPP38P78345 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.65■■□□□ 1.06
RPP38P78345 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RPP38P78345 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC21.64■■□□□ 1.06
RPP38P78345 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RPP38P78345 KRT18P24-201ENST00000344739 1156 ntBASIC21.64■■□□□ 1.05
RPP38P78345 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP38P78345 AC103724.3-201ENST00000564481 992 ntBASIC21.64■■□□□ 1.05
RPP38P78345 THA1P-201ENST00000590384 1145 ntBASIC21.64■■□□□ 1.05
RPP38P78345 AC011551.1-201ENST00000614101 683 ntBASIC21.64■■□□□ 1.05
RPP38P78345 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
RPP38P78345 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP38P78345 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC21.64■■□□□ 1.05
RPP38P78345 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RPP38P78345 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
RPP38P78345 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RPP38P78345 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPP38P78345 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPP38P78345 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPP38P78345 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RPP38P78345 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.62■■□□□ 1.05
RPP38P78345 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC21.62■■□□□ 1.05
RPP38P78345 AC004812.2-201ENST00000611079 2094 ntBASIC21.62■■□□□ 1.05
RPP38P78345 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RPP38P78345 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.61■■□□□ 1.05
RPP38P78345 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 AC079834.2-201ENST00000609776 1949 ntBASIC21.61■■□□□ 1.05
RPP38P78345 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.61■■□□□ 1.05
RPP38P78345 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.61■■□□□ 1.05
RPP38P78345 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
RPP38P78345 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP38P78345 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.6■■□□□ 1.05
RPP38P78345 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP38P78345 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC21.6■■□□□ 1.05
RPP38P78345 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
RPP38P78345 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP38P78345 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
RPP38P78345 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.59■■□□□ 1.05
RPP38P78345 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RPP38P78345 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
RPP38P78345 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
RPP38P78345 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
RPP38P78345 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
RPP38P78345 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
RPP38P78345 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPP38P78345 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
RPP38P78345 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
RPP38P78345 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
RPP38P78345 AC120024.1-201ENST00000562672 995 ntBASIC21.58■■□□□ 1.05
RPP38P78345 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
RPP38P78345 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP38P78345 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
RPP38P78345 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
RPP38P78345 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
RPP38P78345 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP38P78345 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.56■■□□□ 1.04
RPP38P78345 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.56■■□□□ 1.04
RPP38P78345 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.56■■□□□ 1.04
RPP38P78345 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
RPP38P78345 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.56■■□□□ 1.04
RPP38P78345 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP38P78345 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.56■■□□□ 1.04
RPP38P78345 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
RPP38P78345 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
RPP38P78345 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.55■■□□□ 1.04
RPP38P78345 AL451085.2-201ENST00000605085 799 ntBASIC21.55■■□□□ 1.04
RPP38P78345 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.55■■□□□ 1.04
RPP38P78345 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
RPP38P78345 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 142.7 ms