Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 AUA1YFL010W-A 285 nt5.9□□□□□ -1.46
RTR1P40084 RCL1YOL010W 1104 nt5.9□□□□□ -1.46
RTR1P40084 ELP3YPL086C 1674 nt5.9□□□□□ -1.47
RTR1P40084 PAL1YDR348C 1500 nt5.89□□□□□ -1.47
RTR1P40084 SIF2YBR103W 1608 nt5.89□□□□□ -1.47
RTR1P40084 YJL206CYJL206C 2277 nt5.89□□□□□ -1.47
RTR1P40084 TUB3YML124C 1338 nt5.89□□□□□ -1.47
RTR1P40084 SSB2YNL209W 1842 nt5.88□□□□□ -1.47
RTR1P40084 ARF2YDL137W 546 nt5.88□□□□□ -1.47
RTR1P40084 YGL072CYGL072C 360 nt5.88□□□□□ -1.47
RTR1P40084 PCT1YGR202C 1275 nt5.88□□□□□ -1.47
RTR1P40084 DCD1YHR144C 939 nt5.88□□□□□ -1.47
RTR1P40084 YIR020W-AYIR020W-A 243 nt5.88□□□□□ -1.47
RTR1P40084 RPP0YLR340W 939 nt5.88□□□□□ -1.47
RTR1P40084 MAK3YPR051W 531 nt5.88□□□□□ -1.47
RTR1P40084 UMP1YBR173C 447 nt5.88□□□□□ -1.47
RTR1P40084 LHP1YDL051W 828 nt5.87□□□□□ -1.47
RTR1P40084 SOH1YGL127C 384 nt5.87□□□□□ -1.47
RTR1P40084 PUS5YLR165C 765 nt5.87□□□□□ -1.47
RTR1P40084 CCS1YMR038C 750 nt5.87□□□□□ -1.47
RTR1P40084 MAP2YBL091C 1266 nt5.87□□□□□ -1.47
RTR1P40084 YPR109WYPR109W 885 nt5.87□□□□□ -1.47
RTR1P40084 YPL245WYPL245W 1365 nt5.87□□□□□ -1.47
RTR1P40084 MAG2YLR427W 2013 nt5.87□□□□□ -1.47
RTR1P40084 FAA4YMR246W 2085 nt5.87□□□□□ -1.47
RTR1P40084 EMP46YLR080W 1335 nt5.86□□□□□ -1.47
RTR1P40084 TYW3YGL050W 822 nt5.86□□□□□ -1.47
RTR1P40084 RPO26YPR187W 468 nt5.86□□□□□ -1.47
RTR1P40084 DEF1YKL054C 2217 nt5.86□□□□□ -1.47
RTR1P40084 DDC1YPL194W 1839 nt5.85□□□□□ -1.47
RTR1P40084 SKG3YLR187W 3081 nt5.85□□□□□ -1.47
RTR1P40084 VMS1YDR049W 1899 nt5.85□□□□□ -1.47
RTR1P40084 RCK2YLR248W 1833 nt5.85□□□□□ -1.47
RTR1P40084 YEL020CYEL020C 1683 nt5.85□□□□□ -1.47
RTR1P40084 SUB2YDL084W 1341 nt5.84□□□□□ -1.47
RTR1P40084 YGR066CYGR066C 879 nt5.84□□□□□ -1.47
RTR1P40084 YNL134CYNL134C 1131 nt5.84□□□□□ -1.47
RTR1P40084 PWP1YLR196W 1731 nt5.84□□□□□ -1.47
RTR1P40084 KGD1YIL125W 3045 nt5.84□□□□□ -1.47
RTR1P40084 TKL1YPR074C 2043 nt5.84□□□□□ -1.48
RTR1P40084 YDL012CYDL012C 324 nt5.83□□□□□ -1.48
RTR1P40084 COX11YPL132W 903 nt5.83□□□□□ -1.48
RTR1P40084 SET5YHR207C 1581 nt5.83□□□□□ -1.48
RTR1P40084 STE20YHL007C 2820 nt5.83□□□□□ -1.48
RTR1P40084 CBF5YLR175W 1452 nt5.83□□□□□ -1.48
RTR1P40084 SAF1YBR280C 1914 nt5.82□□□□□ -1.48
RTR1P40084 YEH2YLR020C 1617 nt5.82□□□□□ -1.48
RTR1P40084 TRP1YDR007W 675 nt5.82□□□□□ -1.48
RTR1P40084 NCS6YGL211W 1080 nt5.82□□□□□ -1.48
RTR1P40084 YIL077CYIL077C 963 nt5.82□□□□□ -1.48
RTR1P40084 RRB1YMR131C 1536 nt5.82□□□□□ -1.48
RTR1P40084 RHO4YKR055W 876 nt5.81□□□□□ -1.48
RTR1P40084 OAZ1YPL052W 879 nt5.81□□□□□ -1.48
RTR1P40084 CDC4YFL009W 2340 nt5.8□□□□□ -1.48
RTR1P40084 MNT2YGL257C 1677 nt5.8□□□□□ -1.48
RTR1P40084 PPG1YNR032W 1107 nt5.8□□□□□ -1.48
RTR1P40084 CIN5YOR028C 888 nt5.8□□□□□ -1.48
RTR1P40084 TAF5YBR198C 2397 nt5.8□□□□□ -1.48
RTR1P40084 KRE6YPR159W 2163 nt5.8□□□□□ -1.48
RTR1P40084 NOP58YOR310C 1536 nt5.79□□□□□ -1.48
RTR1P40084 SIT1YEL065W 1887 nt5.79□□□□□ -1.48
RTR1P40084 ALG6YOR002W 1635 nt5.79□□□□□ -1.48
RTR1P40084 IPK1YDR315C 846 nt5.79□□□□□ -1.48
RTR1P40084 CIA2YHR122W 696 nt5.79□□□□□ -1.48
RTR1P40084 PCL1YNL289W 840 nt5.79□□□□□ -1.48
RTR1P40084 UBP9YER098W 2265 nt5.79□□□□□ -1.48
RTR1P40084 ERG4YGL012W 1422 nt5.79□□□□□ -1.48
RTR1P40084 SEC18YBR080C 2277 nt5.78□□□□□ -1.48
RTR1P40084 TPS3YMR261C 3165 nt5.78□□□□□ -1.48
RTR1P40084 SAP4YGL229C 2457 nt5.78□□□□□ -1.48
RTR1P40084 AXL2YIL140W 2472 nt5.78□□□□□ -1.48
RTR1P40084 ECM23YPL021W 564 nt5.78□□□□□ -1.48
RTR1P40084 NME1NME1 340 nt5.78□□□□□ -1.48
RTR1P40084 RAD28YDR030C 1521 nt5.78□□□□□ -1.48
RTR1P40084 ROG3YFR022W 2202 nt5.78□□□□□ -1.48
RTR1P40084 TDA6YPR157W 1404 nt5.77□□□□□ -1.49
RTR1P40084 SNA2YDR525W-A 240 nt5.77□□□□□ -1.49
RTR1P40084 BUB3YOR026W 1026 nt5.77□□□□□ -1.49
RTR1P40084 TEL2YGR099W 2067 nt5.77□□□□□ -1.49
RTR1P40084 ATG7YHR171W 1893 nt5.77□□□□□ -1.49
RTR1P40084 UTP9YHR196W 1728 nt5.77□□□□□ -1.49
RTR1P40084 CPS1YJL172W 1731 nt5.77□□□□□ -1.49
RTR1P40084 SPR6YER115C 576 nt5.76□□□□□ -1.49
RTR1P40084 URE2YNL229C 1065 nt5.76□□□□□ -1.49
RTR1P40084 SOL1YNR034W 966 nt5.76□□□□□ -1.49
RTR1P40084 CWC27YPL064C 906 nt5.76□□□□□ -1.49
RTR1P40084 SDA1YGR245C 2304 nt5.76□□□□□ -1.49
RTR1P40084 ALD3YMR169C 1521 nt5.75□□□□□ -1.49
RTR1P40084 ALD2YMR170C 1521 nt5.75□□□□□ -1.49
RTR1P40084 FAT3YKL187C 2253 nt5.75□□□□□ -1.49
RTR1P40084 ARG82YDR173C 1068 nt5.75□□□□□ -1.49
RTR1P40084 GUP2YPL189W 1830 nt5.75□□□□□ -1.49
RTR1P40084 BNA5YLR231C 1362 nt5.75□□□□□ -1.49
RTR1P40084 SIP5YMR140W 1470 nt5.75□□□□□ -1.49
RTR1P40084 NMD3YHR170W 1557 nt5.75□□□□□ -1.49
RTR1P40084 GAD1YMR250W 1758 nt5.75□□□□□ -1.49
RTR1P40084 tS(AGA)D3tS(AGA)D3 83 nt5.74□□□□□ -1.49
RTR1P40084 COA3YJL062W-A 258 nt5.74□□□□□ -1.49
RTR1P40084 UBI4YLL039C 1146 nt5.74□□□□□ -1.49
RTR1P40084 MAL11YGR289C 1851 nt5.74□□□□□ -1.49
Retrieved 100 of 7,029 protein–RNA pairs in 22.8 ms