Protein–RNA interactions for Protein: P34903

GABRA3, Gamma-aminobutyric acid receptor subunit alpha-3, humanhuman

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3P34903 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.37■■□□□ 1.01
GABRA3P34903 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.36■■□□□ 1.01
GABRA3P34903 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
GABRA3P34903 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
GABRA3P34903 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
GABRA3P34903 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
GABRA3P34903 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.36■■□□□ 1.01
GABRA3P34903 RARRES2P1-201ENST00000474487 481 ntBASIC21.36■■□□□ 1.01
GABRA3P34903 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.36■■□□□ 1.01
GABRA3P34903 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.36■■□□□ 1.01
GABRA3P34903 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABRA3P34903 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
GABRA3P34903 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
GABRA3P34903 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABRA3P34903 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.35■■□□□ 1.01
GABRA3P34903 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
GABRA3P34903 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.35■■□□□ 1.01
GABRA3P34903 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.34■■□□□ 1.01
GABRA3P34903 AL161729.1-201ENST00000604104 1402 ntBASIC21.34■■□□□ 1.01
GABRA3P34903 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.34■■□□□ 1.01
GABRA3P34903 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
GABRA3P34903 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
GABRA3P34903 AC131274.2-201ENST00000580697 1507 ntBASIC21.34■■□□□ 1.01
GABRA3P34903 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
GABRA3P34903 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.33■■□□□ 1.01
GABRA3P34903 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.33■■□□□ 1.01
GABRA3P34903 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GABRA3P34903 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1
GABRA3P34903 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
GABRA3P34903 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.32■■□□□ 1
GABRA3P34903 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GABRA3P34903 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.32■■□□□ 1
GABRA3P34903 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.32■■□□□ 1
GABRA3P34903 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
GABRA3P34903 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.32■■□□□ 1
GABRA3P34903 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.31■■□□□ 1
GABRA3P34903 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
GABRA3P34903 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
GABRA3P34903 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.3■■□□□ 1
GABRA3P34903 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.3■■□□□ 1
GABRA3P34903 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.3■■□□□ 1
GABRA3P34903 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
GABRA3P34903 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.3■■□□□ 1
GABRA3P34903 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
GABRA3P34903 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABRA3P34903 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.29■■□□□ 1
GABRA3P34903 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABRA3P34903 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
GABRA3P34903 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.29■■□□□ 1
GABRA3P34903 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.29■■□□□ 1
GABRA3P34903 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.29■■□□□ 1
GABRA3P34903 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.29■■□□□ 1
GABRA3P34903 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC21.29■■□□□ 1
GABRA3P34903 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
GABRA3P34903 AC137630.3-201ENST00000607245 391 ntBASIC21.28■■□□□ 1
GABRA3P34903 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.28■■□□□ 1
GABRA3P34903 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
GABRA3P34903 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.28■■□□□ 1
GABRA3P34903 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
GABRA3P34903 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.27■■□□□ 1
GABRA3P34903 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.27■■□□□ 1
GABRA3P34903 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC21.27■■□□□ 1
GABRA3P34903 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.27■■□□□ 1
GABRA3P34903 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABRA3P34903 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABRA3P34903 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.27■■□□□ 1
GABRA3P34903 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.27■■□□□ 1
GABRA3P34903 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.27■■□□□ 1
GABRA3P34903 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
GABRA3P34903 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.27■■□□□ 1
GABRA3P34903 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
GABRA3P34903 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRA3P34903 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRA3P34903 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
GABRA3P34903 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRA3P34903 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
GABRA3P34903 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
GABRA3P34903 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms