Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.22■□□□□ 0.99
LCN1P31025 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
LCN1P31025 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LCN1P31025 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.21■□□□□ 0.99
LCN1P31025 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.21■□□□□ 0.99
LCN1P31025 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.2■□□□□ 0.98
LCN1P31025 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LCN1P31025 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.2■□□□□ 0.98
LCN1P31025 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LCN1P31025 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.19■□□□□ 0.98
LCN1P31025 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LCN1P31025 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.19■□□□□ 0.98
LCN1P31025 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LCN1P31025 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LCN1P31025 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LCN1P31025 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
LCN1P31025 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 RARRES2P1-201ENST00000474487 481 ntBASIC21.18■□□□□ 0.98
LCN1P31025 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.18■□□□□ 0.98
LCN1P31025 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.18■□□□□ 0.98
LCN1P31025 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.18■□□□□ 0.98
LCN1P31025 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.18■□□□□ 0.98
LCN1P31025 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
LCN1P31025 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LCN1P31025 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN1P31025 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.17■□□□□ 0.98
LCN1P31025 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
LCN1P31025 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.17■□□□□ 0.98
LCN1P31025 PRTG-204ENST00000561292 833 ntTSL 3 BASIC21.17■□□□□ 0.98
LCN1P31025 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN1P31025 AC131274.2-201ENST00000580697 1507 ntBASIC21.17■□□□□ 0.98
LCN1P31025 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN1P31025 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN1P31025 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.17■□□□□ 0.98
LCN1P31025 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
LCN1P31025 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
LCN1P31025 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LCN1P31025 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCN1P31025 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.16■□□□□ 0.98
LCN1P31025 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LCN1P31025 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCN1P31025 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LCN1P31025 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LCN1P31025 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
LCN1P31025 Z92544.1-202ENST00000571933 1220 ntBASIC21.16■□□□□ 0.98
LCN1P31025 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LCN1P31025 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCN1P31025 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.15■□□□□ 0.98
LCN1P31025 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.15■□□□□ 0.98
LCN1P31025 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.15■□□□□ 0.98
LCN1P31025 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.15■□□□□ 0.98
LCN1P31025 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCN1P31025 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LCN1P31025 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCN1P31025 BX664725.1-201ENST00000438252 379 ntBASIC21.15■□□□□ 0.98
LCN1P31025 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LCN1P31025 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
LCN1P31025 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
LCN1P31025 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LCN1P31025 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LCN1P31025 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC21.14■□□□□ 0.98
LCN1P31025 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
LCN1P31025 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
LCN1P31025 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.14■□□□□ 0.97
LCN1P31025 AC004448.1-201ENST00000458332 883 ntBASIC21.14■□□□□ 0.97
LCN1P31025 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
LCN1P31025 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
LCN1P31025 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.13■□□□□ 0.97
LCN1P31025 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LCN1P31025 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN1P31025 AC021242.3-201ENST00000607598 1377 ntBASIC21.13■□□□□ 0.97
LCN1P31025 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN1P31025 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN1P31025 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LCN1P31025 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
LCN1P31025 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
LCN1P31025 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LCN1P31025 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LCN1P31025 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCN1P31025 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.12■□□□□ 0.97
LCN1P31025 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCN1P31025 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.12■□□□□ 0.97
LCN1P31025 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCN1P31025 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
LCN1P31025 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LCN1P31025 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.11■□□□□ 0.97
LCN1P31025 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LCN1P31025 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms