Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
MSR1P21757 MIR4281-201ENST00000580852 62 ntBASIC20.28■□□□□ 0.84
MSR1P21757 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.28■□□□□ 0.84
MSR1P21757 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSR1P21757 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSR1P21757 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.27■□□□□ 0.84
MSR1P21757 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.27■□□□□ 0.84
MSR1P21757 AC103834.1-201ENST00000520383 144 ntBASIC20.27■□□□□ 0.84
MSR1P21757 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSR1P21757 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.27■□□□□ 0.84
MSR1P21757 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
MSR1P21757 ABCB10P4-201ENST00000566803 2184 ntBASIC20.27■□□□□ 0.83
MSR1P21757 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
MSR1P21757 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSR1P21757 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
MSR1P21757 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSR1P21757 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.26■□□□□ 0.83
MSR1P21757 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.26■□□□□ 0.83
MSR1P21757 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSR1P21757 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
MSR1P21757 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.26■□□□□ 0.83
MSR1P21757 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.25■□□□□ 0.83
MSR1P21757 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
MSR1P21757 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
MSR1P21757 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.25■□□□□ 0.83
MSR1P21757 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.25■□□□□ 0.83
MSR1P21757 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MSR1P21757 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
MSR1P21757 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
MSR1P21757 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSR1P21757 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
MSR1P21757 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
MSR1P21757 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
MSR1P21757 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.24■□□□□ 0.83
MSR1P21757 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.24■□□□□ 0.83
MSR1P21757 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
MSR1P21757 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.23■□□□□ 0.83
MSR1P21757 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
MSR1P21757 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
MSR1P21757 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSR1P21757 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.22■□□□□ 0.83
MSR1P21757 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.22■□□□□ 0.83
MSR1P21757 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
MSR1P21757 AC103724.3-201ENST00000564481 992 ntBASIC20.22■□□□□ 0.83
MSR1P21757 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSR1P21757 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSR1P21757 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
MSR1P21757 AC131274.2-201ENST00000580697 1507 ntBASIC20.22■□□□□ 0.83
MSR1P21757 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.22■□□□□ 0.83
MSR1P21757 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
MSR1P21757 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.21■□□□□ 0.83
MSR1P21757 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.21■□□□□ 0.83
MSR1P21757 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
MSR1P21757 AF131216.4-201ENST00000638924 1588 ntBASIC20.21■□□□□ 0.83
MSR1P21757 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.2■□□□□ 0.82
MSR1P21757 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC20.2■□□□□ 0.82
MSR1P21757 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.2■□□□□ 0.82
MSR1P21757 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
MSR1P21757 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
MSR1P21757 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSR1P21757 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSR1P21757 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSR1P21757 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
MSR1P21757 AL031848.2-201ENST00000607670 837 ntBASIC20.19■□□□□ 0.82
MSR1P21757 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.19■□□□□ 0.82
MSR1P21757 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
MSR1P21757 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.19■□□□□ 0.82
MSR1P21757 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC20.18■□□□□ 0.82
MSR1P21757 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.18■□□□□ 0.82
MSR1P21757 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
MSR1P21757 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.17■□□□□ 0.82
MSR1P21757 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSR1P21757 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
MSR1P21757 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
MSR1P21757 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.17■□□□□ 0.82
MSR1P21757 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms