Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 IRS3P-201ENST00000223076 1006 ntBASIC28.67■■■□□ 2.18
COL11A2P13942 AL138724.1-201ENST00000606771 1088 ntBASIC28.67■■■□□ 2.18
COL11A2P13942 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL11A2P13942 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.67■■■□□ 2.18
COL11A2P13942 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
COL11A2P13942 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC28.67■■■□□ 2.18
COL11A2P13942 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL11A2P13942 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
COL11A2P13942 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL11A2P13942 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
COL11A2P13942 AC092171.4-201ENST00000609130 632 ntBASIC28.66■■■□□ 2.18
COL11A2P13942 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
COL11A2P13942 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC28.66■■■□□ 2.18
COL11A2P13942 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
COL11A2P13942 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC28.65■■■□□ 2.18
COL11A2P13942 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL11A2P13942 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
COL11A2P13942 KRT18P5-201ENST00000436075 1291 ntBASIC28.65■■■□□ 2.18
COL11A2P13942 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC28.65■■■□□ 2.18
COL11A2P13942 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
COL11A2P13942 GLI3-203ENST00000437480 451 ntTSL 2 BASIC28.64■■■□□ 2.18
COL11A2P13942 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC28.64■■■□□ 2.18
COL11A2P13942 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
COL11A2P13942 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC28.64■■■□□ 2.17
COL11A2P13942 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC28.64■■■□□ 2.17
COL11A2P13942 SNX3-202ENST00000349379 890 ntTSL 2 BASIC28.63■■■□□ 2.17
COL11A2P13942 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC28.63■■■□□ 2.17
COL11A2P13942 SP2-202ENST00000613139 908 ntTSL 5 BASIC28.63■■■□□ 2.17
COL11A2P13942 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL11A2P13942 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL11A2P13942 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
COL11A2P13942 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
COL11A2P13942 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC28.63■■■□□ 2.17
COL11A2P13942 AC009102.2-201ENST00000606772 1639 ntBASIC28.63■■■□□ 2.17
COL11A2P13942 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC28.62■■■□□ 2.17
COL11A2P13942 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
COL11A2P13942 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC28.62■■■□□ 2.17
COL11A2P13942 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
COL11A2P13942 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC28.61■■■□□ 2.17
COL11A2P13942 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC28.61■■■□□ 2.17
COL11A2P13942 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC28.61■■■□□ 2.17
COL11A2P13942 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC28.61■■■□□ 2.17
COL11A2P13942 RARRES2P11-201ENST00000635158 484 ntBASIC28.61■■■□□ 2.17
COL11A2P13942 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL11A2P13942 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
COL11A2P13942 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL11A2P13942 REST-206ENST00000612429 1376 ntTSL 5 BASIC28.61■■■□□ 2.17
COL11A2P13942 REST-207ENST00000616975 1370 ntTSL 5 BASIC28.61■■■□□ 2.17
COL11A2P13942 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL11A2P13942 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
COL11A2P13942 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
COL11A2P13942 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC28.6■■■□□ 2.17
COL11A2P13942 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL11A2P13942 AC034268.1-201ENST00000441047 882 ntBASIC28.6■■■□□ 2.17
COL11A2P13942 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC28.6■■■□□ 2.17
COL11A2P13942 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC28.6■■■□□ 2.17
COL11A2P13942 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
COL11A2P13942 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL11A2P13942 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL11A2P13942 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC28.59■■■□□ 2.17
COL11A2P13942 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL11A2P13942 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.59■■■□□ 2.17
COL11A2P13942 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.58■■■□□ 2.17
COL11A2P13942 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
COL11A2P13942 ASB1-202ENST00000409297 878 ntTSL 5 BASIC28.58■■■□□ 2.17
COL11A2P13942 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC28.58■■■□□ 2.17
COL11A2P13942 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC28.58■■■□□ 2.17
COL11A2P13942 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL11A2P13942 AC092437.1-201ENST00000624794 1048 ntBASIC28.58■■■□□ 2.17
COL11A2P13942 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC28.58■■■□□ 2.17
COL11A2P13942 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.58■■■□□ 2.17
COL11A2P13942 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
COL11A2P13942 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC28.57■■■□□ 2.16
COL11A2P13942 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.57■■■□□ 2.16
COL11A2P13942 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
COL11A2P13942 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC28.57■■■□□ 2.16
COL11A2P13942 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
COL11A2P13942 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC28.57■■■□□ 2.16
COL11A2P13942 PKM-203ENST00000389093 2279 ntTSL 5 BASIC28.56■■■□□ 2.16
COL11A2P13942 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
COL11A2P13942 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC28.56■■■□□ 2.16
COL11A2P13942 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
COL11A2P13942 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
COL11A2P13942 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC28.55■■■□□ 2.16
COL11A2P13942 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC28.55■■■□□ 2.16
COL11A2P13942 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC28.55■■■□□ 2.16
COL11A2P13942 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
COL11A2P13942 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC28.55■■■□□ 2.16
COL11A2P13942 HES6-206ENST00000409574 738 ntTSL 2 BASIC28.55■■■□□ 2.16
COL11A2P13942 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC28.55■■■□□ 2.16
COL11A2P13942 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC28.55■■■□□ 2.16
COL11A2P13942 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
COL11A2P13942 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL11A2P13942 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL11A2P13942 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC28.54■■■□□ 2.16
COL11A2P13942 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
COL11A2P13942 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
COL11A2P13942 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4L2-201ENST00000561772 1275 ntBASIC28.53■■■□□ 2.16
COL11A2P13942 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms