Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.57■■□□□ 1.36
COL4A2P08572 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL4A2P08572 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
COL4A2P08572 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
COL4A2P08572 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
COL4A2P08572 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.56■■□□□ 1.36
COL4A2P08572 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC23.56■■□□□ 1.36
COL4A2P08572 AC099791.2-201ENST00000605725 427 ntBASIC23.56■■□□□ 1.36
COL4A2P08572 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
COL4A2P08572 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 AL162430.1-201ENST00000480705 870 ntBASIC23.55■■□□□ 1.36
COL4A2P08572 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.55■■□□□ 1.36
COL4A2P08572 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC23.55■■□□□ 1.36
COL4A2P08572 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.55■■□□□ 1.36
COL4A2P08572 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
COL4A2P08572 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
COL4A2P08572 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL4A2P08572 AC099791.1-201ENST00000416440 715 ntBASIC23.54■■□□□ 1.36
COL4A2P08572 RHOF-204ENST00000537265 699 ntTSL 2 BASIC23.54■■□□□ 1.36
COL4A2P08572 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL4A2P08572 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
COL4A2P08572 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.54■■□□□ 1.36
COL4A2P08572 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
COL4A2P08572 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
COL4A2P08572 AC092803.2-201ENST00000564287 1899 ntBASIC23.54■■□□□ 1.36
COL4A2P08572 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.54■■□□□ 1.36
COL4A2P08572 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
COL4A2P08572 AC006455.2-201ENST00000429931 906 ntBASIC23.53■■□□□ 1.36
COL4A2P08572 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC23.53■■□□□ 1.36
COL4A2P08572 AL138724.1-201ENST00000606771 1088 ntBASIC23.53■■□□□ 1.36
COL4A2P08572 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
COL4A2P08572 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC23.53■■□□□ 1.36
COL4A2P08572 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23.53■■□□□ 1.36
COL4A2P08572 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.53■■□□□ 1.36
COL4A2P08572 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL4A2P08572 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
COL4A2P08572 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL4A2P08572 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL4A2P08572 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
COL4A2P08572 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.52■■□□□ 1.36
COL4A2P08572 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
COL4A2P08572 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
COL4A2P08572 REST-206ENST00000612429 1376 ntTSL 5 BASIC23.52■■□□□ 1.35
COL4A2P08572 REST-207ENST00000616975 1370 ntTSL 5 BASIC23.52■■□□□ 1.35
COL4A2P08572 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.51■■□□□ 1.35
COL4A2P08572 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC23.51■■□□□ 1.35
COL4A2P08572 AC092171.4-201ENST00000609130 632 ntBASIC23.51■■□□□ 1.35
COL4A2P08572 AC136469.2-201ENST00000623944 1028 ntBASIC23.51■■□□□ 1.35
COL4A2P08572 AC009102.2-201ENST00000606772 1639 ntBASIC23.51■■□□□ 1.35
COL4A2P08572 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC23.51■■□□□ 1.35
COL4A2P08572 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
COL4A2P08572 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC23.5■■□□□ 1.35
COL4A2P08572 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL4A2P08572 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL4A2P08572 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
COL4A2P08572 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
COL4A2P08572 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
COL4A2P08572 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
COL4A2P08572 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
COL4A2P08572 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC23.49■■□□□ 1.35
COL4A2P08572 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.49■■□□□ 1.35
COL4A2P08572 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.49■■□□□ 1.35
COL4A2P08572 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.49■■□□□ 1.35
COL4A2P08572 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.49■■□□□ 1.35
COL4A2P08572 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
COL4A2P08572 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
COL4A2P08572 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL4A2P08572 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL4A2P08572 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
COL4A2P08572 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.48■■□□□ 1.35
COL4A2P08572 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
COL4A2P08572 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL4A2P08572 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
COL4A2P08572 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
COL4A2P08572 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.47■■□□□ 1.35
COL4A2P08572 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC23.47■■□□□ 1.35
COL4A2P08572 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC23.47■■□□□ 1.35
COL4A2P08572 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC23.47■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms