Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MMP2P08253 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MMP2P08253 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
MMP2P08253 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
MMP2P08253 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.27■■□□□ 1.32
MMP2P08253 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC23.27■■□□□ 1.32
MMP2P08253 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC23.27■■□□□ 1.32
MMP2P08253 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
MMP2P08253 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC23.27■■□□□ 1.32
MMP2P08253 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.27■■□□□ 1.32
MMP2P08253 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP2P08253 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.26■■□□□ 1.31
MMP2P08253 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.26■■□□□ 1.31
MMP2P08253 ABCB10P4-201ENST00000566803 2184 ntBASIC23.26■■□□□ 1.31
MMP2P08253 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
MMP2P08253 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.26■■□□□ 1.31
MMP2P08253 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.26■■□□□ 1.31
MMP2P08253 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC23.26■■□□□ 1.31
MMP2P08253 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.26■■□□□ 1.31
MMP2P08253 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP2P08253 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP2P08253 BX664725.1-201ENST00000438252 379 ntBASIC23.25■■□□□ 1.31
MMP2P08253 AC004448.1-201ENST00000458332 883 ntBASIC23.25■■□□□ 1.31
MMP2P08253 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MMP2P08253 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
MMP2P08253 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
MMP2P08253 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
MMP2P08253 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
MMP2P08253 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP2P08253 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MMP2P08253 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
MMP2P08253 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.24■■□□□ 1.31
MMP2P08253 Z92544.1-202ENST00000571933 1220 ntBASIC23.24■■□□□ 1.31
MMP2P08253 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.24■■□□□ 1.31
MMP2P08253 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
MMP2P08253 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC23.23■■□□□ 1.31
MMP2P08253 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.23■■□□□ 1.31
MMP2P08253 SNX5-217ENST00000606557 1087 ntBASIC23.23■■□□□ 1.31
MMP2P08253 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
MMP2P08253 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
MMP2P08253 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 AC239859.2-201ENST00000444165 318 ntBASIC23.22■■□□□ 1.31
MMP2P08253 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC23.22■■□□□ 1.31
MMP2P08253 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.22■■□□□ 1.31
MMP2P08253 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC23.22■■□□□ 1.31
MMP2P08253 THRA-202ENST00000394121 2260 ntTSL 2 BASIC23.22■■□□□ 1.31
MMP2P08253 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
MMP2P08253 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.21■■□□□ 1.31
MMP2P08253 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
MMP2P08253 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 AL035685.1-201ENST00000636663 812 ntBASIC23.21■■□□□ 1.31
MMP2P08253 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
MMP2P08253 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.21■■□□□ 1.31
MMP2P08253 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP2P08253 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP2P08253 EI24-213ENST00000618552 1747 ntTSL 5 BASIC23.2■■□□□ 1.3
MMP2P08253 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.2■■□□□ 1.3
MMP2P08253 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
MMP2P08253 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MMP2P08253 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
MMP2P08253 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MMP2P08253 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
MMP2P08253 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.19■■□□□ 1.3
MMP2P08253 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
MMP2P08253 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MMP2P08253 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
MMP2P08253 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
MMP2P08253 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MMP2P08253 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
MMP2P08253 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.18■■□□□ 1.3
MMP2P08253 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP2P08253 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
MMP2P08253 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.18■■□□□ 1.3
MMP2P08253 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
MMP2P08253 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
MMP2P08253 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
MMP2P08253 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
MMP2P08253 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
MMP2P08253 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC23.17■■□□□ 1.3
MMP2P08253 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.17■■□□□ 1.3
MMP2P08253 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.17■■□□□ 1.3
MMP2P08253 MIR4787-201ENST00000607364 84 ntBASIC23.17■■□□□ 1.3
MMP2P08253 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC23.17■■□□□ 1.3
MMP2P08253 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms