Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETP07949 RASA4CP-201ENST00000424092 1398 ntBASIC23.23■■□□□ 1.31
RETP07949 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RETP07949 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 AC090192.1-201ENST00000517740 490 ntBASIC23.22■■□□□ 1.31
RETP07949 CA15P2-201ENST00000611168 834 ntBASIC23.22■■□□□ 1.31
RETP07949 RARRES2P11-201ENST00000635158 484 ntBASIC23.22■■□□□ 1.31
RETP07949 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.21■■□□□ 1.31
RETP07949 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.21■■□□□ 1.31
RETP07949 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RETP07949 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.2■■□□□ 1.3
RETP07949 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.2■■□□□ 1.3
RETP07949 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 AC092171.4-201ENST00000609130 632 ntBASIC23.2■■□□□ 1.3
RETP07949 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 SYT6-210ENST00000641643 1587 ntBASIC23.19■■□□□ 1.3
RETP07949 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
RETP07949 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.18■■□□□ 1.3
RETP07949 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RETP07949 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RETP07949 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RETP07949 MIR4767-201ENST00000582827 78 ntBASIC23.18■■□□□ 1.3
RETP07949 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.18■■□□□ 1.3
RETP07949 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.18■■□□□ 1.3
RETP07949 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETP07949 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RETP07949 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 IRS3P-201ENST00000223076 1006 ntBASIC23.17■■□□□ 1.3
RETP07949 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.17■■□□□ 1.3
RETP07949 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.16■■□□□ 1.3
RETP07949 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.16■■□□□ 1.3
RETP07949 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 AC027682.1-201ENST00000562846 899 ntBASIC23.16■■□□□ 1.3
RETP07949 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.16■■□□□ 1.3
RETP07949 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RETP07949 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.14■■□□□ 1.29
RETP07949 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.14■■□□□ 1.29
RETP07949 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.14■■□□□ 1.29
RETP07949 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETP07949 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.14■■□□□ 1.29
RETP07949 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.13■■□□□ 1.29
RETP07949 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.13■■□□□ 1.29
RETP07949 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RETP07949 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RETP07949 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.12■■□□□ 1.29
RETP07949 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.12■■□□□ 1.29
RETP07949 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
RETP07949 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RETP07949 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.11■■□□□ 1.29
RETP07949 FOXO3B-201ENST00000395675 1928 ntBASIC23.11■■□□□ 1.29
RETP07949 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETP07949 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETP07949 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms