Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RETP07949 RASA4CP-201ENST00000424092 1398 ntBASIC23.23■■□□□ 1.31
RETP07949 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
RETP07949 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 AC090192.1-201ENST00000517740 490 ntBASIC23.22■■□□□ 1.31
RETP07949 CA15P2-201ENST00000611168 834 ntBASIC23.22■■□□□ 1.31
RETP07949 RARRES2P11-201ENST00000635158 484 ntBASIC23.22■■□□□ 1.31
RETP07949 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RETP07949 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC23.21■■□□□ 1.31
RETP07949 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC23.21■■□□□ 1.31
RETP07949 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
RETP07949 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
RETP07949 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.2■■□□□ 1.3
RETP07949 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RETP07949 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC23.2■■□□□ 1.3
RETP07949 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC23.2■■□□□ 1.3
RETP07949 AC092171.4-201ENST00000609130 632 ntBASIC23.2■■□□□ 1.3
RETP07949 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 SYT6-210ENST00000641643 1587 ntBASIC23.19■■□□□ 1.3
RETP07949 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
RETP07949 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.19■■□□□ 1.3
RETP07949 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC23.19■■□□□ 1.3
RETP07949 PKM-204ENST00000449901 2526 ntTSL 2 BASIC23.18■■□□□ 1.3
RETP07949 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
RETP07949 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
RETP07949 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RETP07949 MIR4767-201ENST00000582827 78 ntBASIC23.18■■□□□ 1.3
RETP07949 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.18■■□□□ 1.3
RETP07949 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.18■■□□□ 1.3
RETP07949 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
RETP07949 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
RETP07949 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 IRS3P-201ENST00000223076 1006 ntBASIC23.17■■□□□ 1.3
RETP07949 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.17■■□□□ 1.3
RETP07949 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
RETP07949 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.16■■□□□ 1.3
RETP07949 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.16■■□□□ 1.3
RETP07949 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 AC027682.1-201ENST00000562846 899 ntBASIC23.16■■□□□ 1.3
RETP07949 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.16■■□□□ 1.3
RETP07949 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RETP07949 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
RETP07949 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.15■■□□□ 1.3
RETP07949 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RETP07949 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RETP07949 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.14■■□□□ 1.29
RETP07949 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.14■■□□□ 1.29
RETP07949 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC23.14■■□□□ 1.29
RETP07949 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RETP07949 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.14■■□□□ 1.29
RETP07949 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC23.13■■□□□ 1.29
RETP07949 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.13■■□□□ 1.29
RETP07949 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
RETP07949 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
RETP07949 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.12■■□□□ 1.29
RETP07949 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.12■■□□□ 1.29
RETP07949 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.11■■□□□ 1.29
RETP07949 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC23.11■■□□□ 1.29
RETP07949 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.11■■□□□ 1.29
RETP07949 FOXO3B-201ENST00000395675 1928 ntBASIC23.11■■□□□ 1.29
RETP07949 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
RETP07949 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETP07949 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
RETP07949 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC23.1■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms