Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRAP04437 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRAP04437 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC17.46■□□□□ 0.39
TCRAP04437 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.46■□□□□ 0.39
TCRAP04437 AC092296.2-201ENST00000589470 999 ntBASIC17.46■□□□□ 0.39
TCRAP04437 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TCRAP04437 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRAP04437 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRAP04437 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRAP04437 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TCRAP04437 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TCRAP04437 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TCRAP04437 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TCRAP04437 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC17.45■□□□□ 0.38
TCRAP04437 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TCRAP04437 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TCRAP04437 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TCRAP04437 AC093536.1-201ENST00000569153 554 ntBASIC17.44■□□□□ 0.38
TCRAP04437 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.44■□□□□ 0.38
TCRAP04437 AC016575.1-201ENST00000607026 382 ntBASIC17.44■□□□□ 0.38
TCRAP04437 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC17.44■□□□□ 0.38
TCRAP04437 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TCRAP04437 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
TCRAP04437 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TCRAP04437 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.43■□□□□ 0.38
TCRAP04437 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC17.43■□□□□ 0.38
TCRAP04437 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC17.43■□□□□ 0.38
TCRAP04437 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRAP04437 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRAP04437 DUSP8P3-201ENST00000399571 1760 ntBASIC17.43■□□□□ 0.38
TCRAP04437 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRAP04437 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TCRAP04437 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC17.43■□□□□ 0.38
TCRAP04437 EP400NL-214ENST00000641289 2402 ntBASIC17.42■□□□□ 0.38
TCRAP04437 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 AC092068.2-201ENST00000590491 1708 ntBASIC17.42■□□□□ 0.38
TCRAP04437 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TCRAP04437 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.42■□□□□ 0.38
TCRAP04437 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC17.42■□□□□ 0.38
TCRAP04437 ECEL1P2-201ENST00000461596 1295 ntBASIC17.42■□□□□ 0.38
TCRAP04437 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TCRAP04437 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TCRAP04437 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
TCRAP04437 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
TCRAP04437 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRAP04437 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
TCRAP04437 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRAP04437 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC17.41■□□□□ 0.38
TCRAP04437 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
TCRAP04437 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TCRAP04437 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRAP04437 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TCRAP04437 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TCRAP04437 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.4■□□□□ 0.38
TCRAP04437 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TCRAP04437 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
TCRAP04437 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TCRAP04437 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TCRAP04437 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms