Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 CEBPA-AS1-201ENST00000592982 2198 ntBASIC25.28■■□□□ 1.64
CHRNA1P02708 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CHRNA1P02708 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC25.27■■□□□ 1.64
CHRNA1P02708 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC25.27■■□□□ 1.64
CHRNA1P02708 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.27■■□□□ 1.64
CHRNA1P02708 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.27■■□□□ 1.64
CHRNA1P02708 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
CHRNA1P02708 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.26■■□□□ 1.63
CHRNA1P02708 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.26■■□□□ 1.63
CHRNA1P02708 AL136967.2-201ENST00000623968 743 ntBASIC25.26■■□□□ 1.63
CHRNA1P02708 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
CHRNA1P02708 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.26■■□□□ 1.63
CHRNA1P02708 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC25.26■■□□□ 1.63
CHRNA1P02708 LSR-205ENST00000427250 1606 ntTSL 2 BASIC25.26■■□□□ 1.63
CHRNA1P02708 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.25■■□□□ 1.63
CHRNA1P02708 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHRNA1P02708 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.25■■□□□ 1.63
CHRNA1P02708 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC25.25■■□□□ 1.63
CHRNA1P02708 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.25■■□□□ 1.63
CHRNA1P02708 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
CHRNA1P02708 DUX4L19-201ENST00000557448 1267 ntBASIC25.25■■□□□ 1.63
CHRNA1P02708 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
CHRNA1P02708 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHRNA1P02708 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
CHRNA1P02708 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC25.24■■□□□ 1.63
CHRNA1P02708 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
CHRNA1P02708 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
CHRNA1P02708 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.24■■□□□ 1.63
CHRNA1P02708 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHRNA1P02708 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
CHRNA1P02708 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC25.23■■□□□ 1.63
CHRNA1P02708 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
CHRNA1P02708 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.23■■□□□ 1.63
CHRNA1P02708 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.23■■□□□ 1.63
CHRNA1P02708 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.23■■□□□ 1.63
CHRNA1P02708 GRAMD4P4-201ENST00000613563 1115 ntBASIC25.23■■□□□ 1.63
CHRNA1P02708 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
CHRNA1P02708 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.23■■□□□ 1.63
CHRNA1P02708 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHRNA1P02708 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CHRNA1P02708 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CHRNA1P02708 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CHRNA1P02708 AF213884.3-201ENST00000563833 479 ntBASIC25.22■■□□□ 1.63
CHRNA1P02708 RARRES2P6-201ENST00000567333 442 ntBASIC25.22■■□□□ 1.63
CHRNA1P02708 AL022069.1-201ENST00000568025 1636 ntBASIC25.22■■□□□ 1.63
CHRNA1P02708 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.22■■□□□ 1.63
CHRNA1P02708 AC145676.1-201ENST00000514988 2004 ntBASIC25.22■■□□□ 1.63
CHRNA1P02708 SYT6-210ENST00000641643 1587 ntBASIC25.22■■□□□ 1.63
CHRNA1P02708 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC25.21■■□□□ 1.63
CHRNA1P02708 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHRNA1P02708 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHRNA1P02708 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
CHRNA1P02708 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.21■■□□□ 1.63
CHRNA1P02708 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC25.21■■□□□ 1.63
CHRNA1P02708 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
CHRNA1P02708 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.21■■□□□ 1.63
CHRNA1P02708 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC25.21■■□□□ 1.63
CHRNA1P02708 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.63
CHRNA1P02708 AC009102.2-201ENST00000606772 1639 ntBASIC25.2■■□□□ 1.62
CHRNA1P02708 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHRNA1P02708 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHRNA1P02708 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
CHRNA1P02708 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHRNA1P02708 MIR939-201ENST00000401314 82 ntBASIC25.2■■□□□ 1.62
CHRNA1P02708 AC026271.2-201ENST00000428091 497 ntBASIC25.2■■□□□ 1.62
CHRNA1P02708 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.2■■□□□ 1.62
CHRNA1P02708 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC25.2■■□□□ 1.62
CHRNA1P02708 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
CHRNA1P02708 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.2■■□□□ 1.62
CHRNA1P02708 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC25.2■■□□□ 1.62
CHRNA1P02708 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC25.2■■□□□ 1.62
CHRNA1P02708 SERBP1P1-201ENST00000396021 1160 ntBASIC25.19■■□□□ 1.62
CHRNA1P02708 AP001330.3-201ENST00000520123 633 ntBASIC25.19■■□□□ 1.62
CHRNA1P02708 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.19■■□□□ 1.62
CHRNA1P02708 AC099791.2-201ENST00000605725 427 ntBASIC25.19■■□□□ 1.62
CHRNA1P02708 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
CHRNA1P02708 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.19■■□□□ 1.62
CHRNA1P02708 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CHRNA1P02708 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC25.18■■□□□ 1.62
CHRNA1P02708 AC105265.2-201ENST00000467189 838 ntBASIC25.18■■□□□ 1.62
CHRNA1P02708 AC092171.4-201ENST00000609130 632 ntBASIC25.18■■□□□ 1.62
CHRNA1P02708 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
CHRNA1P02708 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
CHRNA1P02708 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
CHRNA1P02708 LGR4-203ENST00000480977 492 ntTSL 2 BASIC25.17■■□□□ 1.62
CHRNA1P02708 MIR4767-201ENST00000582827 78 ntBASIC25.17■■□□□ 1.62
CHRNA1P02708 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.17■■□□□ 1.62
CHRNA1P02708 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms