Protein–RNA interactions for Protein: P01135

TGFA, Protransforming growth factor alpha, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFAP01135 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC18.97■□□□□ 0.63
TGFAP01135 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TGFAP01135 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TGFAP01135 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.96■□□□□ 0.63
TGFAP01135 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
TGFAP01135 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TGFAP01135 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TGFAP01135 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.96■□□□□ 0.63
TGFAP01135 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.96■□□□□ 0.63
TGFAP01135 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TGFAP01135 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TGFAP01135 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
TGFAP01135 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TGFAP01135 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TGFAP01135 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TGFAP01135 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC18.95■□□□□ 0.62
TGFAP01135 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TGFAP01135 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TGFAP01135 AC092803.2-201ENST00000564287 1899 ntBASIC18.94■□□□□ 0.62
TGFAP01135 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TGFAP01135 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TGFAP01135 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TGFAP01135 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.94■□□□□ 0.62
TGFAP01135 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TGFAP01135 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TGFAP01135 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TGFAP01135 MIR939-201ENST00000401314 82 ntBASIC18.94■□□□□ 0.62
TGFAP01135 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC18.94■□□□□ 0.62
TGFAP01135 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TGFAP01135 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.93■□□□□ 0.62
TGFAP01135 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 RBM38-205ENST00000440234 686 ntTSL 2 BASIC18.93■□□□□ 0.62
TGFAP01135 AC091305.1-201ENST00000479476 895 ntBASIC18.93■□□□□ 0.62
TGFAP01135 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.93■□□□□ 0.62
TGFAP01135 AP001330.3-201ENST00000520123 633 ntBASIC18.93■□□□□ 0.62
TGFAP01135 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.93■□□□□ 0.62
TGFAP01135 AC104564.3-201ENST00000582367 638 ntBASIC18.93■□□□□ 0.62
TGFAP01135 MIR4767-201ENST00000582827 78 ntBASIC18.93■□□□□ 0.62
TGFAP01135 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
TGFAP01135 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC18.92■□□□□ 0.62
TGFAP01135 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TGFAP01135 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.92■□□□□ 0.62
TGFAP01135 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TGFAP01135 AC099791.2-201ENST00000605725 427 ntBASIC18.92■□□□□ 0.62
TGFAP01135 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TGFAP01135 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.92■□□□□ 0.62
TGFAP01135 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TGFAP01135 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 AC131274.2-201ENST00000580697 1507 ntBASIC18.91■□□□□ 0.62
TGFAP01135 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TGFAP01135 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TGFAP01135 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TGFAP01135 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TGFAP01135 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TGFAP01135 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC18.9■□□□□ 0.62
TGFAP01135 SERBP1P1-201ENST00000396021 1160 ntBASIC18.9■□□□□ 0.62
TGFAP01135 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.9■□□□□ 0.62
TGFAP01135 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.9■□□□□ 0.62
TGFAP01135 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TGFAP01135 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
TGFAP01135 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TGFAP01135 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TGFAP01135 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
TGFAP01135 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.89■□□□□ 0.61
TGFAP01135 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC18.89■□□□□ 0.61
TGFAP01135 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.89■□□□□ 0.61
TGFAP01135 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TGFAP01135 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.89■□□□□ 0.61
TGFAP01135 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TGFAP01135 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TGFAP01135 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TGFAP01135 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TGFAP01135 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TGFAP01135 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.88■□□□□ 0.61
TGFAP01135 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.88■□□□□ 0.61
TGFAP01135 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.88■□□□□ 0.61
TGFAP01135 CA15P2-201ENST00000611168 834 ntBASIC18.88■□□□□ 0.61
TGFAP01135 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.88■□□□□ 0.61
TGFAP01135 RASA4CP-201ENST00000424092 1398 ntBASIC18.88■□□□□ 0.61
TGFAP01135 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms