Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
CDRT1O95170 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
CDRT1O95170 PKD1P6-201ENST00000343738 4769 ntBASIC20.43■□□□□ 0.86
CDRT1O95170 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
CDRT1O95170 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
CDRT1O95170 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.42■□□□□ 0.86
CDRT1O95170 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
CDRT1O95170 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.41■□□□□ 0.86
CDRT1O95170 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.41■□□□□ 0.86
CDRT1O95170 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CDRT1O95170 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
CDRT1O95170 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.41■□□□□ 0.86
CDRT1O95170 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CDRT1O95170 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT1O95170 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT1O95170 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT1O95170 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT1O95170 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CDRT1O95170 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC20.4■□□□□ 0.86
CDRT1O95170 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDRT1O95170 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.4■□□□□ 0.86
CDRT1O95170 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
CDRT1O95170 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.4■□□□□ 0.86
CDRT1O95170 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDRT1O95170 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CDRT1O95170 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CDRT1O95170 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CDRT1O95170 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CDRT1O95170 LINC00526-201ENST00000581067 1875 ntBASIC20.39■□□□□ 0.86
CDRT1O95170 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC20.39■□□□□ 0.85
CDRT1O95170 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.39■□□□□ 0.85
CDRT1O95170 C1orf229-201ENST00000623686 2258 ntBASIC20.39■□□□□ 0.85
CDRT1O95170 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CDRT1O95170 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CDRT1O95170 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
CDRT1O95170 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
CDRT1O95170 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.38■□□□□ 0.85
CDRT1O95170 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CDRT1O95170 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.38■□□□□ 0.85
CDRT1O95170 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
CDRT1O95170 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
CDRT1O95170 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.37■□□□□ 0.85
CDRT1O95170 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.37■□□□□ 0.85
CDRT1O95170 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
CDRT1O95170 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC20.37■□□□□ 0.85
CDRT1O95170 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.37■□□□□ 0.85
CDRT1O95170 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.37■□□□□ 0.85
CDRT1O95170 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC20.37■□□□□ 0.85
CDRT1O95170 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CDRT1O95170 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
CDRT1O95170 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.36■□□□□ 0.85
CDRT1O95170 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
CDRT1O95170 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.36■□□□□ 0.85
CDRT1O95170 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC20.36■□□□□ 0.85
CDRT1O95170 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.36■□□□□ 0.85
CDRT1O95170 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CDRT1O95170 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CDRT1O95170 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms