Protein–RNA interactions for Protein: O75631

UPK3A, Uroplakin-3a, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3AO75631 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
UPK3AO75631 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK3AO75631 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
UPK3AO75631 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
UPK3AO75631 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK3AO75631 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
UPK3AO75631 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
UPK3AO75631 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.59■□□□□ 0.89
UPK3AO75631 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK3AO75631 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPK3AO75631 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.59■□□□□ 0.89
UPK3AO75631 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.59■□□□□ 0.89
UPK3AO75631 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
UPK3AO75631 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
UPK3AO75631 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
UPK3AO75631 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.58■□□□□ 0.89
UPK3AO75631 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.58■□□□□ 0.89
UPK3AO75631 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
UPK3AO75631 MIR4281-201ENST00000580852 62 ntBASIC20.58■□□□□ 0.89
UPK3AO75631 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK3AO75631 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK3AO75631 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
UPK3AO75631 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 HLA-L-211ENST00000482052 1765 ntBASIC20.57■□□□□ 0.88
UPK3AO75631 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.57■□□□□ 0.88
UPK3AO75631 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.57■□□□□ 0.88
UPK3AO75631 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
UPK3AO75631 TK2-216ENST00000564917 1156 ntTSL 3 BASIC20.57■□□□□ 0.88
UPK3AO75631 ABCB10P4-201ENST00000566803 2184 ntBASIC20.57■□□□□ 0.88
UPK3AO75631 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.57■□□□□ 0.88
UPK3AO75631 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.57■□□□□ 0.88
UPK3AO75631 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
UPK3AO75631 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
UPK3AO75631 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.56■□□□□ 0.88
UPK3AO75631 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
UPK3AO75631 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
UPK3AO75631 AC012676.1-201ENST00000574705 1949 ntBASIC20.56■□□□□ 0.88
UPK3AO75631 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
UPK3AO75631 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK3AO75631 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
UPK3AO75631 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.55■□□□□ 0.88
UPK3AO75631 AL451085.2-201ENST00000605085 799 ntBASIC20.55■□□□□ 0.88
UPK3AO75631 AC068473.5-201ENST00000616428 2072 ntBASIC20.55■□□□□ 0.88
UPK3AO75631 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
UPK3AO75631 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.54■□□□□ 0.88
UPK3AO75631 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.54■□□□□ 0.88
UPK3AO75631 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.54■□□□□ 0.88
UPK3AO75631 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 PRTG-204ENST00000561292 833 ntTSL 3 BASIC20.54■□□□□ 0.88
UPK3AO75631 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
UPK3AO75631 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
UPK3AO75631 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.53■□□□□ 0.88
UPK3AO75631 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK3AO75631 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK3AO75631 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
UPK3AO75631 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.53■□□□□ 0.88
UPK3AO75631 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC20.53■□□□□ 0.88
UPK3AO75631 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK3AO75631 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK3AO75631 DUSP8P5-201ENST00000422884 1815 ntBASIC20.52■□□□□ 0.88
UPK3AO75631 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK3AO75631 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
UPK3AO75631 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
UPK3AO75631 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.52■□□□□ 0.87
UPK3AO75631 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
UPK3AO75631 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.51■□□□□ 0.87
UPK3AO75631 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.51■□□□□ 0.87
UPK3AO75631 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
UPK3AO75631 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
UPK3AO75631 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
UPK3AO75631 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
UPK3AO75631 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
UPK3AO75631 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
UPK3AO75631 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
UPK3AO75631 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
UPK3AO75631 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.5■□□□□ 0.87
UPK3AO75631 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms