Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
PRAMEF2O60811 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.58■■□□□ 1.04
PRAMEF2O60811 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF2O60811 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.57■■□□□ 1.04
PRAMEF2O60811 LINC01124-201ENST00000409786 2117 ntBASIC21.57■■□□□ 1.04
PRAMEF2O60811 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.57■■□□□ 1.04
PRAMEF2O60811 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.57■■□□□ 1.04
PRAMEF2O60811 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
PRAMEF2O60811 AC141586.4-201ENST00000624558 1573 ntBASIC21.57■■□□□ 1.04
PRAMEF2O60811 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
PRAMEF2O60811 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF2O60811 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF2O60811 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
PRAMEF2O60811 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF2O60811 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.56■■□□□ 1.04
PRAMEF2O60811 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
PRAMEF2O60811 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF2O60811 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF2O60811 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF2O60811 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
PRAMEF2O60811 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
PRAMEF2O60811 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
PRAMEF2O60811 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF2O60811 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.54■■□□□ 1.04
PRAMEF2O60811 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF2O60811 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF2O60811 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
PRAMEF2O60811 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF2O60811 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF2O60811 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF2O60811 LINC00543-201ENST00000567234 1845 ntBASIC21.53■■□□□ 1.04
PRAMEF2O60811 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF2O60811 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.53■■□□□ 1.04
PRAMEF2O60811 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.53■■□□□ 1.04
PRAMEF2O60811 AC010997.5-201ENST00000609182 354 ntBASIC21.53■■□□□ 1.04
PRAMEF2O60811 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.53■■□□□ 1.04
PRAMEF2O60811 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEF2O60811 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.53■■□□□ 1.04
PRAMEF2O60811 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC21.53■■□□□ 1.04
PRAMEF2O60811 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
PRAMEF2O60811 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEF2O60811 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
PRAMEF2O60811 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 MTDHP2-201ENST00000601468 714 ntBASIC21.52■■□□□ 1.04
PRAMEF2O60811 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.52■■□□□ 1.04
PRAMEF2O60811 AF131216.4-201ENST00000638924 1588 ntBASIC21.52■■□□□ 1.04
PRAMEF2O60811 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
PRAMEF2O60811 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
PRAMEF2O60811 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.51■■□□□ 1.03
PRAMEF2O60811 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEF2O60811 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC21.51■■□□□ 1.03
PRAMEF2O60811 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
PRAMEF2O60811 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
PRAMEF2O60811 SENP5-202ENST00000419026 973 ntTSL 3 BASIC21.5■■□□□ 1.03
PRAMEF2O60811 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.5■■□□□ 1.03
PRAMEF2O60811 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF2O60811 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF2O60811 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.5■■□□□ 1.03
PRAMEF2O60811 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF2O60811 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
PRAMEF2O60811 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
PRAMEF2O60811 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 AL161729.1-201ENST00000604104 1402 ntBASIC21.49■■□□□ 1.03
PRAMEF2O60811 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
PRAMEF2O60811 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
PRAMEF2O60811 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.49■■□□□ 1.03
PRAMEF2O60811 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.49■■□□□ 1.03
PRAMEF2O60811 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
PRAMEF2O60811 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 AL022069.1-201ENST00000568025 1636 ntBASIC21.48■■□□□ 1.03
PRAMEF2O60811 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF2O60811 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 MIR6724-1-201ENST00000616420 92 ntBASIC21.48■■□□□ 1.03
PRAMEF2O60811 MIR6724-2-201ENST00000616483 92 ntBASIC21.48■■□□□ 1.03
PRAMEF2O60811 MIR6724-4-201ENST00000617390 92 ntBASIC21.48■■□□□ 1.03
PRAMEF2O60811 MIR6724-3-201ENST00000622482 92 ntBASIC21.48■■□□□ 1.03
PRAMEF2O60811 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.48■■□□□ 1.03
PRAMEF2O60811 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PRAMEF2O60811 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF2O60811 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF2O60811 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
PRAMEF2O60811 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms