Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC21.94■■□□□ 1.1
PCDH7O60245 AL161729.1-201ENST00000604104 1402 ntBASIC21.94■■□□□ 1.1
PCDH7O60245 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PCDH7O60245 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PCDH7O60245 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PCDH7O60245 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
PCDH7O60245 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.93■■□□□ 1.1
PCDH7O60245 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
PCDH7O60245 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH7O60245 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.93■■□□□ 1.1
PCDH7O60245 AC120024.1-201ENST00000562672 995 ntBASIC21.93■■□□□ 1.1
PCDH7O60245 AL033527.3-201ENST00000566366 1196 ntBASIC21.93■■□□□ 1.1
PCDH7O60245 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH7O60245 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH7O60245 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.93■■□□□ 1.1
PCDH7O60245 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PCDH7O60245 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.92■■□□□ 1.1
PCDH7O60245 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
PCDH7O60245 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH7O60245 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
PCDH7O60245 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.92■■□□□ 1.1
PCDH7O60245 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PCDH7O60245 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH7O60245 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.91■■□□□ 1.1
PCDH7O60245 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC21.91■■□□□ 1.1
PCDH7O60245 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PCDH7O60245 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 AL022069.1-201ENST00000568025 1636 ntBASIC21.91■■□□□ 1.1
PCDH7O60245 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
PCDH7O60245 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
PCDH7O60245 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH7O60245 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH7O60245 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDH7O60245 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH7O60245 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDH7O60245 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH7O60245 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDH7O60245 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDH7O60245 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH7O60245 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.89■■□□□ 1.09
PCDH7O60245 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH7O60245 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH7O60245 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH7O60245 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDH7O60245 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.88■■□□□ 1.09
PCDH7O60245 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.88■■□□□ 1.09
PCDH7O60245 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH7O60245 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH7O60245 THA1P-201ENST00000590384 1145 ntBASIC21.88■■□□□ 1.09
PCDH7O60245 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDH7O60245 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDH7O60245 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH7O60245 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
PCDH7O60245 KRT18P24-201ENST00000344739 1156 ntBASIC21.87■■□□□ 1.09
PCDH7O60245 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH7O60245 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDH7O60245 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDH7O60245 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH7O60245 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH7O60245 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.86■■□□□ 1.09
PCDH7O60245 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDH7O60245 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDH7O60245 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
PCDH7O60245 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDH7O60245 AC131274.2-201ENST00000580697 1507 ntBASIC21.85■■□□□ 1.09
PCDH7O60245 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH7O60245 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH7O60245 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH7O60245 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH7O60245 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC21.85■■□□□ 1.09
PCDH7O60245 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDH7O60245 MIR4281-201ENST00000580852 62 ntBASIC21.85■■□□□ 1.09
PCDH7O60245 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDH7O60245 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.85■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms