Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN4O14493 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.65■■□□□ 1.06
CLDN4O14493 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN4O14493 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
CLDN4O14493 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.65■■□□□ 1.06
CLDN4O14493 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CLDN4O14493 AC141586.4-201ENST00000624558 1573 ntBASIC21.65■■□□□ 1.06
CLDN4O14493 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN4O14493 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.64■■□□□ 1.06
CLDN4O14493 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN4O14493 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC21.64■■□□□ 1.06
CLDN4O14493 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CLDN4O14493 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 TSPY9P-201ENST00000440215 945 ntBASIC21.64■■□□□ 1.05
CLDN4O14493 TSPY11P-201ENST00000442607 1045 ntBASIC21.64■■□□□ 1.05
CLDN4O14493 SNX5-217ENST00000606557 1087 ntBASIC21.64■■□□□ 1.05
CLDN4O14493 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.64■■□□□ 1.05
CLDN4O14493 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CLDN4O14493 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CLDN4O14493 LINC01124-201ENST00000409786 2117 ntBASIC21.64■■□□□ 1.05
CLDN4O14493 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CLDN4O14493 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN4O14493 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN4O14493 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CLDN4O14493 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.63■■□□□ 1.05
CLDN4O14493 MTDHP2-201ENST00000601468 714 ntBASIC21.63■■□□□ 1.05
CLDN4O14493 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC21.63■■□□□ 1.05
CLDN4O14493 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CLDN4O14493 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN4O14493 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN4O14493 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.62■■□□□ 1.05
CLDN4O14493 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CLDN4O14493 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CLDN4O14493 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.62■■□□□ 1.05
CLDN4O14493 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CLDN4O14493 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.61■■□□□ 1.05
CLDN4O14493 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
CLDN4O14493 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CLDN4O14493 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.61■■□□□ 1.05
CLDN4O14493 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.61■■□□□ 1.05
CLDN4O14493 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN4O14493 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 MIR6722-201ENST00000617286 78 ntBASIC21.61■■□□□ 1.05
CLDN4O14493 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC21.61■■□□□ 1.05
CLDN4O14493 LINC00543-201ENST00000567234 1845 ntBASIC21.61■■□□□ 1.05
CLDN4O14493 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CLDN4O14493 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CLDN4O14493 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN4O14493 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN4O14493 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
CLDN4O14493 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN4O14493 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.6■■□□□ 1.05
CLDN4O14493 AC010997.5-201ENST00000609182 354 ntBASIC21.6■■□□□ 1.05
CLDN4O14493 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC21.6■■□□□ 1.05
CLDN4O14493 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN4O14493 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN4O14493 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CLDN4O14493 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN4O14493 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN4O14493 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLDN4O14493 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN4O14493 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CLDN4O14493 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLDN4O14493 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
CLDN4O14493 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN4O14493 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
CLDN4O14493 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CLDN4O14493 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN4O14493 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN4O14493 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CLDN4O14493 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN4O14493 KRT16P3-201ENST00000439127 1283 ntBASIC21.58■■□□□ 1.05
CLDN4O14493 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.58■■□□□ 1.05
CLDN4O14493 UNC93B8-201ENST00000511903 705 ntBASIC21.58■■□□□ 1.05
CLDN4O14493 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.58■■□□□ 1.05
CLDN4O14493 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CLDN4O14493 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.57■■□□□ 1.04
CLDN4O14493 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CLDN4O14493 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms