Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NPIPA3F8WFD2 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 SNX5-217ENST00000606557 1087 ntBASIC20.93■□□□□ 0.94
NPIPA3F8WFD2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA3F8WFD2 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.91■□□□□ 0.94
NPIPA3F8WFD2 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 MIR6089-201ENST00000616698 64 ntBASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 AC138932.3-201ENST00000567634 1902 ntBASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA3F8WFD2 AP003733.4-201ENST00000623785 1697 ntBASIC20.89■□□□□ 0.94
NPIPA3F8WFD2 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPIPA3F8WFD2 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA3F8WFD2 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 MIR4466-201ENST00000606121 54 ntBASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPA3F8WFD2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 AL139246.5-201ENST00000606645 996 ntBASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 MIR6722-201ENST00000617286 78 ntBASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA3F8WFD2 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NPIPA3F8WFD2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPIPA3F8WFD2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA3F8WFD2 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA3F8WFD2 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA3F8WFD2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPA3F8WFD2 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPA3F8WFD2 MIR638-201ENST00000385237 100 ntBASIC20.83■□□□□ 0.93
NPIPA3F8WFD2 AL512631.2-201ENST00000604634 923 ntBASIC20.83■□□□□ 0.93
NPIPA3F8WFD2 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms