Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
NPIPA2E9PIF3 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 SNX5-217ENST00000606557 1087 ntBASIC20.93■□□□□ 0.94
NPIPA2E9PIF3 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
NPIPA2E9PIF3 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 NALT1-201ENST00000429224 738 ntTSL 5 BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 MED17-227ENST00000640521 2047 ntTSL 5 BASIC20.91■□□□□ 0.94
NPIPA2E9PIF3 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 MIR6089-201ENST00000616698 64 ntBASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 AC138932.3-201ENST00000567634 1902 ntBASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NPIPA2E9PIF3 AP003733.4-201ENST00000623785 1697 ntBASIC20.89■□□□□ 0.94
NPIPA2E9PIF3 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NPIPA2E9PIF3 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NPIPA2E9PIF3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 MIR4466-201ENST00000606121 54 ntBASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC20.88■□□□□ 0.93
NPIPA2E9PIF3 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 CLTA-206ENST00000466396 695 ntTSL 2 BASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 AL139246.5-201ENST00000606645 996 ntBASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 MIR6722-201ENST00000617286 78 ntBASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NPIPA2E9PIF3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
NPIPA2E9PIF3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NPIPA2E9PIF3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NPIPA2E9PIF3 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC20.85■□□□□ 0.93
NPIPA2E9PIF3 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 QDPR-206ENST00000508623 601 ntTSL 3 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
NPIPA2E9PIF3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPA2E9PIF3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
NPIPA2E9PIF3 MIR638-201ENST00000385237 100 ntBASIC20.83■□□□□ 0.93
NPIPA2E9PIF3 AL512631.2-201ENST00000604634 923 ntBASIC20.83■□□□□ 0.93
NPIPA2E9PIF3 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms