Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RBFOX3A6NFN3 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 AC097358.2-201ENST00000607541 1159 ntBASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RBFOX3A6NFN3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 HLA-L-211ENST00000482052 1765 ntBASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 ANOS2P-203ENST00000472227 1816 ntBASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.14■□□□□ 0.49
RBFOX3A6NFN3 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 AC136428.2-201ENST00000563187 214 ntBASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
RBFOX3A6NFN3 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
RBFOX3A6NFN3 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
RBFOX3A6NFN3 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
RBFOX3A6NFN3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
RBFOX3A6NFN3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
RBFOX3A6NFN3 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
RBFOX3A6NFN3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.08■□□□□ 0.49
RBFOX3A6NFN3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC18.08■□□□□ 0.49
RBFOX3A6NFN3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms