Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
TCRBV3S1A0A5B6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
TCRBV3S1A0A5B6 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TCRBV3S1A0A5B6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 WWC2-AS2-201ENST00000578387 2183 ntBASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TCRBV3S1A0A5B6 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TCRBV3S1A0A5B6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC21.58■■□□□ 1.04
TCRBV3S1A0A5B6 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC21.58■■□□□ 1.04
TCRBV3S1A0A5B6 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
TCRBV3S1A0A5B6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 EFS-203ENST00000429593 2610 ntTSL 2 BASIC21.57■■□□□ 1.04
TCRBV3S1A0A5B6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TCRBV3S1A0A5B6 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 EI24-213ENST00000618552 1747 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV3S1A0A5B6 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.54■■□□□ 1.04
TCRBV3S1A0A5B6 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV3S1A0A5B6 AC007375.3-201ENST00000600936 2314 ntBASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.04
TCRBV3S1A0A5B6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms