Protein–RNA interactions for Protein: A0A5B0

TCRBV16S1A1N1, V_segment translation product (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV16S1A1N1A0A5B0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.55■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 AL161729.1-201ENST00000604104 1402 ntBASIC21.54■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MIR6724-1-201ENST00000616420 92 ntBASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MIR6724-2-201ENST00000616483 92 ntBASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MIR6724-4-201ENST00000617390 92 ntBASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MIR6724-3-201ENST00000622482 92 ntBASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
TCRBV16S1A1N1A0A5B0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC21.52■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 AC131212.1-201ENST00000613771 668 ntBASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.5■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.47■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.47■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TFPT-201ENST00000391757 774 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
TCRBV16S1A1N1A0A5B0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms