Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
CCDC196A0A1B0GTZ2 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC26.78■■□□□ 1.88
CCDC196A0A1B0GTZ2 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 AC009299.2-201ENST00000482477 511 ntBASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
CCDC196A0A1B0GTZ2 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
CCDC196A0A1B0GTZ2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC26.76■■□□□ 1.87
CCDC196A0A1B0GTZ2 AC004448.1-201ENST00000458332 883 ntBASIC26.76■■□□□ 1.87
CCDC196A0A1B0GTZ2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 KRT125P-201ENST00000546827 989 ntBASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
CCDC196A0A1B0GTZ2 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
CCDC196A0A1B0GTZ2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
CCDC196A0A1B0GTZ2 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC196A0A1B0GTZ2 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC26.72■■□□□ 1.87
CCDC196A0A1B0GTZ2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC26.72■■□□□ 1.87
CCDC196A0A1B0GTZ2 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
CCDC196A0A1B0GTZ2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC26.71■■□□□ 1.87
CCDC196A0A1B0GTZ2 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
CCDC196A0A1B0GTZ2 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC26.7■■□□□ 1.87
CCDC196A0A1B0GTZ2 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC26.7■■□□□ 1.86
CCDC196A0A1B0GTZ2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.7■■□□□ 1.86
CCDC196A0A1B0GTZ2 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC196A0A1B0GTZ2 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CCDC196A0A1B0GTZ2 AC239859.2-201ENST00000444165 318 ntBASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 SNX5-217ENST00000606557 1087 ntBASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CCDC196A0A1B0GTZ2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC196A0A1B0GTZ2 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC196A0A1B0GTZ2 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.68■■□□□ 1.86
CCDC196A0A1B0GTZ2 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CCDC196A0A1B0GTZ2 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CCDC196A0A1B0GTZ2 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 MIR4787-201ENST00000607364 84 ntBASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 AC092028.1-203ENST00000608262 953 ntBASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 AL035685.1-201ENST00000636663 812 ntBASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CCDC196A0A1B0GTZ2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 ALDH1A3-203ENST00000557963 1670 ntBASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCDC196A0A1B0GTZ2 ABCB10P4-201ENST00000566803 2184 ntBASIC26.64■■□□□ 1.86
CCDC196A0A1B0GTZ2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
CCDC196A0A1B0GTZ2 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
CCDC196A0A1B0GTZ2 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms