Protein–RNA interactions for Protein: A0A0U1RRI6

CENPVL3, Centromere protein V-like 3, humanhuman

Predictions only

Length 287 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPVL3A0A0U1RRI6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 AC005703.6-201ENST00000623265 1329 ntBASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CENPVL3A0A0U1RRI6 HLA-L-211ENST00000482052 1765 ntBASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CENPVL3A0A0U1RRI6 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CENPVL3A0A0U1RRI6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC18.68■□□□□ 0.58
CENPVL3A0A0U1RRI6 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CENPVL3A0A0U1RRI6 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 AP003733.4-201ENST00000623785 1697 ntBASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.66■□□□□ 0.58
CENPVL3A0A0U1RRI6 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CENPVL3A0A0U1RRI6 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CENPVL3A0A0U1RRI6 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 AL139246.5-201ENST00000606645 996 ntBASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 AC019069.1-201ENST00000610008 1333 ntBASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC18.64■□□□□ 0.57
CENPVL3A0A0U1RRI6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 RALB-208ENST00000631312 311 ntTSL 5 BASIC18.63■□□□□ 0.57
CENPVL3A0A0U1RRI6 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms