Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CCDC163A0A0D9SF12 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 C17orf82-201ENST00000623772 1530 ntBASIC23.01■■□□□ 1.27
CCDC163A0A0D9SF12 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 AC034268.1-201ENST00000441047 882 ntBASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
CCDC163A0A0D9SF12 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CCDC163A0A0D9SF12 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CCDC163A0A0D9SF12 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 SP2-202ENST00000613139 908 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 RARRES2P11-201ENST00000635158 484 ntBASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CCDC163A0A0D9SF12 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
CCDC163A0A0D9SF12 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.95■■□□□ 1.27
CCDC163A0A0D9SF12 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 AC010501.1-201ENST00000606270 1962 ntBASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC22.95■■□□□ 1.26
CCDC163A0A0D9SF12 ERN1-208ENST00000606895 2068 ntBASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.94■■□□□ 1.26
CCDC163A0A0D9SF12 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 ASB1-202ENST00000409297 878 ntTSL 5 BASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 AC090192.1-201ENST00000517740 490 ntBASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
CCDC163A0A0D9SF12 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
CCDC163A0A0D9SF12 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
CCDC163A0A0D9SF12 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms