Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 AL161729.1-201ENST00000604104 1402 ntBASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRAV24A0A0B4J272 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 BHLHE23-202ENST00000612929 1109 ntBASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRAV24A0A0B4J272 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 DUSP8P5-201ENST00000422884 1815 ntBASIC19.28■□□□□ 0.68
TRAV24A0A0B4J272 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 PVT1_1.1-201ENST00000615125 194 ntBASIC19.27■□□□□ 0.68
TRAV24A0A0B4J272 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TRAV24A0A0B4J272 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 TSPY13P-201ENST00000338964 914 ntBASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TRAV24A0A0B4J272 AL022069.1-201ENST00000568025 1636 ntBASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 AC074183.2-201ENST00000623112 922 ntBASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
TRAV24A0A0B4J272 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
TRAV24A0A0B4J272 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 AC120024.1-201ENST00000562672 995 ntBASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 AC010980.1-201ENST00000587192 1142 ntBASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 AC131274.2-201ENST00000580697 1507 ntBASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TRAV24A0A0B4J272 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRAV24A0A0B4J272 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms