Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 AC129492.7-201ENST00000622992 756 ntBASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRAV3A0A0B4J244 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
TRAV3A0A0B4J244 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC18.48■□□□□ 0.55
TRAV3A0A0B4J244 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 KRT18P60-201ENST00000312876 1297 ntBASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 LONRF2P2-201ENST00000439212 571 ntBASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
TRAV3A0A0B4J244 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRAV3A0A0B4J244 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRAV3A0A0B4J244 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRAV3A0A0B4J244 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRAV3A0A0B4J244 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.42■□□□□ 0.54
TRAV3A0A0B4J244 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms