Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV8-2A0A0B4J237 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 BRD4-212ENST00000630599 726 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV8-2A0A0B4J237 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 DUSP8P5-201ENST00000422884 1815 ntBASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV8-2A0A0B4J237 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV8-2A0A0B4J237 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 ABHD17AP5-201ENST00000580133 923 ntBASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV8-2A0A0B4J237 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TRAV8-2A0A0B4J237 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 DUX4L18-201ENST00000553347 1267 ntBASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 NTF6A-201ENST00000591175 560 ntBASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TRAV8-2A0A0B4J237 AC133561.1-201ENST00000568600 2415 ntBASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.33■□□□□ 0.37
TRAV8-2A0A0B4J237 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms