Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 AC142381.3-201ENST00000568208 1670 ntBASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 SSSCA1-AS1-201ENST00000567594 614 ntBASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAV26-1A0A087WT03 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 AC022211.4-201ENST00000625094 2161 ntBASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 AC120024.1-201ENST00000562672 995 ntBASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAV26-1A0A087WT03 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRAV26-1A0A087WT03 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC16.46■□□□□ 0.22
TRAV26-1A0A087WT03 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRAV26-1A0A087WT03 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 AC011551.1-201ENST00000614101 683 ntBASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAV26-1A0A087WT03 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 KRT18P24-201ENST00000344739 1156 ntBASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 C9orf163-202ENST00000624034 2573 ntBASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRAV26-1A0A087WT03 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 AC090877.2-201ENST00000558441 1738 ntBASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRAV26-1A0A087WT03 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 GAK-223ENST00000628912 497 ntTSL 5 BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRAV26-1A0A087WT03 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 TK2-216ENST00000564917 1156 ntTSL 3 BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
TRAV26-1A0A087WT03 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 AL451085.2-201ENST00000605085 799 ntBASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 MIR6089-201ENST00000616698 64 ntBASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
TRAV26-1A0A087WT03 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms