Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.97■□□□□ 0.47
TRAV30A0A087WSZ9 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 LONRF2P2-201ENST00000439212 571 ntBASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.96■□□□□ 0.47
TRAV30A0A087WSZ9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TRAV30A0A087WSZ9 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 ABCB10P4-201ENST00000566803 2184 ntBASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.95■□□□□ 0.46
TRAV30A0A087WSZ9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 U85056.1-201ENST00000616429 682 ntBASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 AC129492.7-201ENST00000622992 756 ntBASIC17.94■□□□□ 0.46
TRAV30A0A087WSZ9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 AC022616.5-201ENST00000518796 181 ntBASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 AC011551.1-201ENST00000614101 683 ntBASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRAV30A0A087WSZ9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC17.92■□□□□ 0.46
TRAV30A0A087WSZ9 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 MTX2-204ENST00000443241 799 ntTSL 3 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 AC019171.1-201ENST00000601251 1056 ntBASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 DUSP8P5-201ENST00000422884 1815 ntBASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRAV30A0A087WSZ9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 AC139795.1-202ENST00000500444 432 ntBASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRAV30A0A087WSZ9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV30A0A087WSZ9 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRAV30A0A087WSZ9 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 KRT18P60-201ENST00000312876 1297 ntBASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 ABHD17AP5-201ENST00000580133 923 ntBASIC17.89■□□□□ 0.45
TRAV30A0A087WSZ9 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms