Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TRBV25-1A0A075B6N4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 RP9P-202ENST00000450133 1212 ntBASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 PKD1P6-201ENST00000343738 4769 ntBASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 AC141586.4-201ENST00000624558 1573 ntBASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRBV25-1A0A075B6N4 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 NFE2L3P1-201ENST00000588207 1959 ntBASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 C1orf229-201ENST00000623686 2258 ntBASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 CEP120-209ENST00000515110 606 ntTSL 3 BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.46■□□□□ 0.23
TRBV25-1A0A075B6N4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV25-1A0A075B6N4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
TRBV25-1A0A075B6N4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV25-1A0A075B6N4 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRBV25-1A0A075B6N4 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRBV25-1A0A075B6N4 SLC25A24-204ENST00000569674 2357 ntBASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 AC233723.2-201ENST00000623798 2106 ntBASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 ABCB10P4-201ENST00000566803 2184 ntBASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TRBV25-1A0A075B6N4 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TRBV25-1A0A075B6N4 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 KRT18P10-201ENST00000388836 1287 ntBASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 RPS2-202ENST00000526522 924 ntTSL 2 BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 AC093536.1-201ENST00000569153 554 ntBASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TRBV25-1A0A075B6N4 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
TRBV25-1A0A075B6N4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC16.4■□□□□ 0.22
TRBV25-1A0A075B6N4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms