Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 AL079307.3-201ENST00000556114 283 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC025048.3-201ENST00000590609 569 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 BX640515.1-201ENST00000617215 977 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC005702.4-201ENST00000618393 416 ntBASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GPR39-203ENST00000622084 900 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2D4Q9Y2X8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AL359183.1-201ENST00000623796 2132 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 NIN-202ENST00000324330 4364 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 RPL13P2-201ENST00000440687 659 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC022145.2-201ENST00000598203 171 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 LINC00628-201ENST00000628516 1289 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC105339.1-204ENST00000636249 355 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AF228730.6-201ENST00000641497 218 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC084121.3-201ENST00000641716 218 ntBASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2D4Q9Y2X8 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms