Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC011474.4-201ENST00000623523 2076 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC092337.1-201ENST00000568699 1129 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 Z92544.3-201ENST00000624747 417 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 TUBB3P1-201ENST00000405796 1332 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC093525.8-201ENST00000624099 1342 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 AC097376.2-205ENST00000610159 5334 ntBASIC14.32□□□□□ -0.12
VAPAQ9P0L0 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.32□□□□□ -0.12
VAPAQ9P0L0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AL158070.2-201ENST00000623713 1621 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AGGF1P1-201ENST00000509500 2073 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AP006288.1-201ENST00000446065 395 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AC027369.6-201ENST00000525520 931 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 ZNF890P-202ENST00000530367 1156 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 MST1P2-201ENST00000457982 2291 ntBASIC14.31□□□□□ -0.12
VAPAQ9P0L0 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
VAPAQ9P0L0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms