Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 BTBD7P1-201ENST00000447253 1453 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 ZBTB45P1-201ENST00000452761 1456 ntBASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
LIN7CQ9NUP9 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
LIN7CQ9NUP9 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
LIN7CQ9NUP9 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC007787.1-201ENST00000588095 1583 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC022144.1-201ENST00000602255 1580 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 MAPKAPK5-206ENST00000550735 11349 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 HNRNPA1P40-201ENST00000426371 1278 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC004890.2-204ENST00000481968 304 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SDHAP3-202ENST00000515467 728 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AL844908.2-201ENST00000609461 460 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AC015656.1-201ENST00000624209 3578 ntBASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
LIN7CQ9NUP9 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 DMBT1P1-203ENST00000636837 4628 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC009477.1-201ENST00000452936 217 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms