Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AL139094.1-201ENST00000405549 1188 ntBASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC008761.3-201ENST00000624803 892 ntBASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 OR2I1P-210ENST00000642037 4691 ntBASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 AC018665.1-201ENST00000622927 1362 ntBASIC15.24■□□□□ 0.03
CHRAC1Q9NRG0 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 MYCLP2-201ENST00000449268 967 ntBASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 LINC02560-201ENST00000596379 459 ntBASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 TMEM261P1-201ENST00000604899 340 ntBASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 AL391825.1-201ENST00000457671 1364 ntBASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CHRAC1Q9NRG0 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 RNU1-114P-201ENST00000365297 166 ntBASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CHRAC1Q9NRG0 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms