Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AC093724.1-201ENST00000448659 1027 ntBASIC13.84□□□□□ -0.19
HMG20AQ9NP66 RPL13AP23-201ENST00000480739 586 ntBASIC13.84□□□□□ -0.19
HMG20AQ9NP66 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AL078644.1-201ENST00000609881 752 ntBASIC13.84□□□□□ -0.19
HMG20AQ9NP66 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
HMG20AQ9NP66 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
HMG20AQ9NP66 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 TMEM198B-204ENST00000484016 896 ntBASIC13.83□□□□□ -0.2
HMG20AQ9NP66 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 KRT19P2-202ENST00000557173 1012 ntBASIC13.83□□□□□ -0.2
HMG20AQ9NP66 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AC018845.2-201ENST00000568326 409 ntBASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 CICP11-201ENST00000434745 2827 ntBASIC13.83□□□□□ -0.2
HMG20AQ9NP66 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AC055811.4-201ENST00000624039 1754 ntBASIC13.83□□□□□ -0.2
HMG20AQ9NP66 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
HMG20AQ9NP66 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms