Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 RARRES2P5-201ENST00000564013 466 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC107373.2-201ENST00000607735 490 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC018665.1-201ENST00000622927 1362 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AL137783.1-201ENST00000623494 1896 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AL158070.2-201ENST00000623713 1621 ntBASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.59□□□□□ -0.07
LRTM1Q9HBL6 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 AL138799.1-201ENST00000448213 1675 ntBASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.07
LRTM1Q9HBL6 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC117489.1-201ENST00000625169 3217 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC055876.3-201ENST00000431496 288 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC026410.3-201ENST00000514280 936 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AL049840.4-201ENST00000602422 811 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC138649.4-201ENST00000612222 287 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AC022144.1-201ENST00000602255 1580 ntBASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC14.58□□□□□ -0.08
LRTM1Q9HBL6 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TNN-203ENST00000622870 3719 ntTSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
LRTM1Q9HBL6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms