Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 STX1A-203ENST00000395155 783 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AC007969.1-201ENST00000433675 447 ntBASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AC119751.2-201ENST00000504529 210 ntBASIC17.79■□□□□ 0.44
RNF41Q9H4P4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC17.79■□□□□ 0.44
RNF41Q9H4P4 SF1-209ENST00000433274 2317 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF41Q9H4P4 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 AL359881.2-201ENST00000602973 570 ntBASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF41Q9H4P4 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 FKBP4P6-201ENST00000457486 1332 ntBASIC17.77■□□□□ 0.44
RNF41Q9H4P4 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 SNX21-203ENST00000372541 771 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF41Q9H4P4 MIR1202-201ENST00000408529 83 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms