Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 OSM-203ENST00000403463 464 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 AL589987.1-201ENST00000453380 819 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 RPL13AP25-201ENST00000484130 612 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 AL390955.2-201ENST00000603032 514 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 ADAMTS7P1-201ENST00000613213 4793 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 FGD5P1-202ENST00000614866 2498 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 AC023908.3-201ENST00000564211 3047 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 PEG13-201ENST00000631594 5667 ntBASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCDC68Q9H2F9 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AJ011931.1-201ENST00000618749 2492 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC104457.1-201ENST00000401024 814 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 FAM86LP-201ENST00000478302 853 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 INGX-202ENST00000489074 768 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 ARL16-202ENST00000570561 768 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC005498.2-205ENST00000593218 784 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 ACE3P-201ENST00000423435 1973 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 CLK3P2-201ENST00000427566 1453 ntBASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.25■□□□□ 0.03
CCDC68Q9H2F9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
CCDC68Q9H2F9 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms