Protein–RNA interactions for Protein: Q9C030

TRIM6, Tripartite motif-containing protein 6, humanhuman

Predicted RBP Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6Q9C030 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 RNA5SP412-201ENST00000516234 123 ntBASIC16.68■□□□□ 0.26
TRIM6Q9C030 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AC023310.1-201ENST00000554836 735 ntBASIC16.68■□□□□ 0.26
TRIM6Q9C030 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AC010328.2-201ENST00000597698 1111 ntBASIC16.68■□□□□ 0.26
TRIM6Q9C030 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 PRSS30P-206ENST00000641773 873 ntBASIC16.68■□□□□ 0.26
TRIM6Q9C030 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 AL138709.1-201ENST00000614840 1693 ntBASIC16.68■□□□□ 0.26
TRIM6Q9C030 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM6Q9C030 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM6Q9C030 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 REXO1L6P-201ENST00000603433 1515 ntBASIC16.67■□□□□ 0.26
TRIM6Q9C030 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 AC026954.1-201ENST00000429771 1293 ntBASIC16.67■□□□□ 0.26
TRIM6Q9C030 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.67■□□□□ 0.26
TRIM6Q9C030 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 KRT8P14-201ENST00000414254 1442 ntBASIC16.67■□□□□ 0.26
TRIM6Q9C030 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM6Q9C030 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM6Q9C030 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM6Q9C030 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM6Q9C030 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 TPM3P8-201ENST00000330554 643 ntBASIC16.66■□□□□ 0.26
TRIM6Q9C030 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.66■□□□□ 0.26
TRIM6Q9C030 BRWD1P1-201ENST00000401091 371 ntBASIC16.66■□□□□ 0.26
TRIM6Q9C030 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM6Q9C030 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms