Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UPF3BQ9BZI7 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AMT-204ENST00000427987 1646 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SUN1-204ENST00000403868 978 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 LINC02560-201ENST00000596379 459 ntBASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 AC023090.2-201ENST00000625182 2110 ntBASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
UPF3BQ9BZI7 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
UPF3BQ9BZI7 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
UPF3BQ9BZI7 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
UPF3BQ9BZI7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms