Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 AC022145.2-201ENST00000598203 171 ntBASIC14.77□□□□□ -0.05
EBF4Q9BQW3 AC007967.4-201ENST00000614700 386 ntBASIC14.77□□□□□ -0.05
EBF4Q9BQW3 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
EBF4Q9BQW3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 KRT18P32-201ENST00000424695 1287 ntBASIC14.76□□□□□ -0.05
EBF4Q9BQW3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 GPS2P2-201ENST00000430745 888 ntBASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC005237.2-201ENST00000434368 219 ntBASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 INE2-201ENST00000630399 1874 ntBASIC14.76□□□□□ -0.05
EBF4Q9BQW3 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
EBF4Q9BQW3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.75□□□□□ -0.05
EBF4Q9BQW3 SPDYE14P-201ENST00000442619 822 ntBASIC14.75□□□□□ -0.05
EBF4Q9BQW3 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 188.2 ms