Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 AC023274.1-201ENST00000418278 595 ntBASIC12.33□□□□□ -0.44
RAB40CQ96S21 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SLED1-202ENST00000512051 380 ntBASIC12.33□□□□□ -0.44
RAB40CQ96S21 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 AC092865.6-201ENST00000642101 219 ntBASIC12.33□□□□□ -0.44
RAB40CQ96S21 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 KRT8P22-201ENST00000562317 1415 ntBASIC12.33□□□□□ -0.44
RAB40CQ96S21 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 AP3S2-216ENST00000617003 1561 ntBASIC12.33□□□□□ -0.44
RAB40CQ96S21 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 USP3-204ENST00000540797 5474 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
RAB40CQ96S21 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
RAB40CQ96S21 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 NEK7-201ENST00000367383 586 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AL353705.2-201ENST00000428243 662 ntBASIC12.32□□□□□ -0.44
RAB40CQ96S21 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 POLD2P1-201ENST00000511220 997 ntBASIC12.32□□□□□ -0.44
RAB40CQ96S21 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AC040169.1-201ENST00000565382 521 ntBASIC12.32□□□□□ -0.44
RAB40CQ96S21 SSH2-211ENST00000590153 570 ntTSL 4 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AC025181.2-201ENST00000606994 802 ntBASIC12.32□□□□□ -0.44
RAB40CQ96S21 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
RAB40CQ96S21 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
RAB40CQ96S21 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms