Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AJ011932.1-201ENST00000621707 465 ntBASIC13.89□□□□□ -0.19
SNX18Q96RF0 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ST20-AS1-201ENST00000560255 4223 ntBASIC13.89□□□□□ -0.19
SNX18Q96RF0 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
SNX18Q96RF0 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SNX18Q96RF0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 BX640514.1-201ENST00000583223 1918 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 CES1P1-201ENST00000421606 1704 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 TOMM22P5-201ENST00000416399 439 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 RPL13P2-201ENST00000440687 659 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 AC140878.1-201ENST00000565277 250 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 NAA60-208ENST00000570819 833 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 PPT1-213ENST00000641319 2388 ntBASIC13.88□□□□□ -0.19
SNX18Q96RF0 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.88□□□□□ -0.19
SNX18Q96RF0 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SNX18Q96RF0 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SNX18Q96RF0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.87□□□□□ -0.19
SNX18Q96RF0 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.87□□□□□ -0.19
SNX18Q96RF0 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms