Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 AC007969.1-201ENST00000433675 447 ntBASIC20.16■□□□□ 0.82
CFAP53Q96M91 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.16■□□□□ 0.82
CFAP53Q96M91 RN7SL713P-201ENST00000582127 302 ntBASIC20.16■□□□□ 0.82
CFAP53Q96M91 AC010328.2-201ENST00000597698 1111 ntBASIC20.16■□□□□ 0.82
CFAP53Q96M91 LINC00554-201ENST00000564841 3011 ntBASIC20.16■□□□□ 0.82
CFAP53Q96M91 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CFAP53Q96M91 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC20.16■□□□□ 0.82
CFAP53Q96M91 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 CNN2P10-201ENST00000443067 918 ntBASIC20.15■□□□□ 0.82
CFAP53Q96M91 C2orf69P2-201ENST00000562032 1123 ntBASIC20.15■□□□□ 0.82
CFAP53Q96M91 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 AC138696.2-201ENST00000607376 223 ntBASIC20.15■□□□□ 0.82
CFAP53Q96M91 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 AP000593.2-201ENST00000542775 1433 ntBASIC20.15■□□□□ 0.82
CFAP53Q96M91 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC20.15■□□□□ 0.82
CFAP53Q96M91 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CFAP53Q96M91 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CFAP53Q96M91 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CFAP53Q96M91 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 LINC00528-201ENST00000600723 2160 ntBASIC20.14■□□□□ 0.81
CFAP53Q96M91 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 AL138725.1-201ENST00000407347 1314 ntBASIC20.14■□□□□ 0.81
CFAP53Q96M91 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 HOMER2P2-201ENST00000451621 847 ntBASIC20.14■□□□□ 0.81
CFAP53Q96M91 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 AP003171.2-201ENST00000528208 925 ntBASIC20.14■□□□□ 0.81
CFAP53Q96M91 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CFAP53Q96M91 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
CFAP53Q96M91 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 GSN-215ENST00000545652 2428 ntTSL 2 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
CFAP53Q96M91 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
CFAP53Q96M91 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms