Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ISCU-203ENST00000431221 799 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AC073648.2-201ENST00000510116 352 ntBASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 RN7SL850P-201ENST00000579959 291 ntBASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AC012617.1-204ENST00000586340 2305 ntBASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
MBD3L1Q8WWY6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 SAPCD2P3-201ENST00000455031 850 ntBASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 NAA38-207ENST00000576861 556 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AC074044.1-201ENST00000609673 707 ntBASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 MED16-214ENST00000617672 554 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CICP16-201ENST00000502609 2813 ntBASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
MBD3L1Q8WWY6 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms