Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 MIR1301-201ENST00000408518 82 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ERP29P1-201ENST00000442902 706 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC090136.2-201ENST00000517809 420 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC067931.2-201ENST00000623655 2003 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 WASH3P-207ENST00000560956 1394 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC090616.6-203ENST00000579186 1945 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 SOD2-205ENST00000444946 917 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 OR2A1-AS1-210ENST00000496968 531 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 ANKRD26P3-201ENST00000454044 2748 ntBASIC9.83□□□□□ -0.84
ALMS1Q8TCU4 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC008536.3-201ENST00000623282 1599 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 PIFO-201ENST00000369737 746 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AL512599.1-201ENST00000430724 685 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 NME6-208ENST00000435684 599 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AL591122.2-201ENST00000624125 1853 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 APOC1-209ENST00000592885 562 ntTSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 SALL4P5-201ENST00000419001 1760 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 HHLA3-202ENST00000361764 692 ntAPPRIS P3 TSL 2 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 RN7SL23P-201ENST00000484055 275 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 KRT8P1-201ENST00000557533 1207 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 AC142086.5-202ENST00000562500 217 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 FKBP4P8-201ENST00000610931 1369 ntBASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
ALMS1Q8TCU4 PHB-210ENST00000511832 1509 ntTSL 2 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms