Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 AC007686.3-201ENST00000619017 3487 ntBASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SMARCC2Q8TAQ2 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 USP32P1-208ENST00000506594 1164 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 AC068587.3-201ENST00000526613 355 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 SLC25A47P1-201ENST00000531577 414 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 RAB43P1-201ENST00000561790 589 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 DUX4L47-201ENST00000566374 394 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 AC106886.1-201ENST00000568660 600 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 BTNL10-201ENST00000595971 695 ntBASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 AGER-206ENST00000375070 1463 ntTSL 5 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SMARCC2Q8TAQ2 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 MPI-203ENST00000535694 1523 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 FES-203ENST00000394302 2133 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AC112492.5-201ENST00000421897 457 ntBASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AC093433.1-201ENST00000458048 571 ntBASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 HILS1-202ENST00000545329 423 ntBASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AC233724.13-201ENST00000598383 410 ntBASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ATF5-205ENST00000600336 682 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AP001267.2-201ENST00000532619 2086 ntBASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
SMARCC2Q8TAQ2 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms