Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 LINC01230-201ENST00000625222 3017 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 AC022144.1-201ENST00000602255 1580 ntBASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
CFAP61Q8NHU2 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 NAA60-208ENST00000570819 833 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 LINC01115-203ENST00000606068 577 ntBASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AL355385.1-201ENST00000606123 409 ntBASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CFAP61Q8NHU2 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AC135586.1-201ENST00000539323 574 ntBASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AC009407.1-201ENST00000568958 598 ntBASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC15.43■□□□□ 0.06
CFAP61Q8NHU2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms